DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30284 and Gramd1c

DIOPT Version :10

Sequence 1:NP_726097.1 Gene:CG30284 / 246527 FlyBaseID:FBgn0050284 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_038944410.1 Gene:Gramd1c / 360717 RGDID:1305433 Length:684 Species:Rattus norvegicus


Alignment Length:264 Identity:75/264 - (28%)
Similarity:127/264 - (48%) Gaps:37/264 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 THRKLSPRSTRCNSVAVTALVSRENIPQTS-GKRG-------KKTPSHRS--TLISTPSKTLQLK 163
            ||..:| |::...|:       ..|.|:.. ||.|       :|:||..|  .|...|||||.| 
  Rat   265 THESVS-RASETESL-------DGNSPERGLGKEGSQSERHVRKSPSLASEKKLGRVPSKTLDL- 320

  Fly   164 TAAGYRRPEDLTARCSASHEG-------RKLLQERLMVR------VDALFNMLFSASPFLQSFHE 215
                 .:.|.|:...|::.:.       .|.||.||.:.      .:.:|.:||::|.|:|.|..
  Rat   321 -----NKNEYLSLDKSSTSDSVDEENIPEKDLQGRLYINRVFHISAERMFELLFTSSHFMQRFTN 380

  Fly   216 RRKSTDLNMGVWARNAGGQNQRTVSMTVALQANVGPKTAKITETQTMRECSQPGQLYSIDVQSVN 280
            .|...|:....|...:||...||::.|:.|...:..|....||.||:.:.|:..|.|.:|.:.:.
  Rat   381 SRNIIDVVSTPWTVESGGDQLRTMTYTIVLSNPLTGKCTAATEKQTLYKESREAQFYLVDSEVLT 445

  Fly   281 ADIPYADTFVVLMHFCLKATVEEHTDVLVFAEIQFLKSVWAVVKTFIERNAYAGLEEFCQSLYSA 345
            .|:||.|.|..|..:|:..:.::...:.|..::::.|..|.::|:.||:|:::.||.:.:.|.|.
  Rat   446 HDVPYHDYFYTLNRYCIVRSAKQRCRLRVSTDLKYRKQPWGLIKSLIEKNSWSSLENYFKQLESD 510

  Fly   346 LLIE 349
            ||:|
  Rat   511 LLME 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30284NP_726097.1 VASt 186..334 CDD:464975 44/153 (29%)
Gramd1cXP_038944410.1 PH-GRAM_GRAMDC 101..194 CDD:275406
VASt 351..498 CDD:464975 40/146 (27%)
Blue background indicates that the domain is not in the aligned region.

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