DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30281 and CG5550

DIOPT Version :10

Sequence 1:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster


Alignment Length:277 Identity:110/277 - (39%)
Similarity:148/277 - (53%) Gaps:38/277 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YLLCVLILSGGSLLSTAQSNKLDLVYKKAESMVSSLKIRLEELKQSYKEITEERGSHETINPSSC 68
            :.|||.              .|.|.|..:..:..::||      |:||:.:           |||
  Fly     6 FALCVF--------------SLGLFYLASAEIGENVKI------QTYKKYS-----------SSC 39

  Fly    69 LAAGINSNGIHVIEVPGLEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQGFGELSGEF 133
            .......:|:..|:| |.:...||||..:||.||.|:|||....|||||.|..|..|||:|.|.|
  Fly    40 KELNPKKSGVQKIQV-GSDVIEVYCDVTIAGKGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNF 103

  Fly   134 FMGLEKLHFLTTAEPYELFVYMEDFNGVVHDARYEDFAIGNASASYALSVLGKYSGDAGDSLRYH 198
            |:||..|:.:::.:|.||::.:.||.|....|.|..|.:||..::|.::.||.|||.|||||.||
  Fly   104 FIGLNNLNKISSLQPQELYIELVDFAGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYH 168

  Fly   199 KGMPFSTFDHDDTGH--GCARIYVGAWWYDQCQR----SNLNGQYLEGGRFEPKMSGRGITWMSW 257
            ...||||||.|:...  .||..|:|||||.:|..    |||||.||.|...:|.:.|.||.|..|
  Fly   169 LYQPFSTFDRDNDNATINCAARYMGAWWYRECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEW 233

  Fly   258 RGYDYGYKFVQMMIRPK 274
            :|:.|.||.|.:|:|||
  Fly   234 KGFTYSYKTVNIMVRPK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30281NP_726164.1 FReD 63..274 CDD:238040 97/216 (45%)
CG5550NP_001246376.1 FReD 34..250 CDD:238040 97/227 (43%)

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