DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30281 and Fga

DIOPT Version :9

Sequence 1:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_001008724.1 Gene:Fga / 361969 RGDID:2603 Length:782 Species:Rattus norvegicus


Alignment Length:289 Identity:106/289 - (36%)
Similarity:148/289 - (51%) Gaps:47/289 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AQSNKLDLVYKKAESMVSSLKIRLEELKQSYKE---ITEERGSHETI---------NPSSCLAAG 72
            :.|:|...|.|:   :..|.|:..|...::::|   .|.:||...|:         :||..    
  Rat   502 SSSSKTSTVRKQ---VTKSYKMADEAASEAHQEGDTRTTKRGRARTMRDCDDVLQTHPSGA---- 559

  Fly    73 INSNGIHVIEVPGLEP-FPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQGFGELS----GE 132
              .|||..|::||... |.||||...:..||.:||:|.|||.||.|.|::|.:|||.|:    ||
  Rat   560 --QNGIFSIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDKGEGE 622

  Fly   133 FFMGLEKLHFLTTAEPYELFVYMEDFNGVVHDARYEDFAIGNASASYALSVLGKYSGDAGDSL-- 195
            |::|.:.||.||..... |.|.:||:.|....|.|. |.:|:.:..|||.| ..|.|.|||:|  
  Rat   623 FWLGNDYLHLLTLRGSV-LRVELEDWAGKEAYAEYH-FRVGSEAEGYALQV-SSYQGTAGDALME 684

  Fly   196 -------RY--HKGMPFSTFDH--DDTGHGCARIYVGAWWYDQCQRSNLNGQYLEGGRFEPKMSG 249
                   .|  |..|.|||||.  |.....||.:|.|.|||:.||.:||||.|..||.::|:.:.
  Rat   685 GSVEEGTEYTSHSNMQFSTFDRDADQWEENCAEVYGGGWWYNSCQAANLNGIYYPGGTYDPRNNS 749

  Fly   250 -----RGITWMSWRGYDYGYKFVQMMIRP 273
                 .|:.|:.:||.||..:.|:|.|||
  Rat   750 PYEIENGVVWVPFRGADYSLRAVRMKIRP 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30281NP_726164.1 FReD 63..274 CDD:238040 94/243 (39%)
FgaNP_001008724.1 Fib_alpha 51..189 CDD:285864
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..374
Fibrinogen_aC 388..453 CDD:288972
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 522..542 5/19 (26%)
FReD 546..779 CDD:238040 94/242 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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