DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30281 and tnn

DIOPT Version :10

Sequence 1:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster
Sequence 2:XP_005171321.1 Gene:tnn / 30234 ZFINID:ZDB-GENE-990415-262 Length:1020 Species:Danio rerio


Alignment Length:238 Identity:84/238 - (35%)
Similarity:123/238 - (51%) Gaps:22/238 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PSSCLAAGINSN---GIHVIEVPG--LEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQ 124
            |..|.....|.|   |::.|.|..  .....||||.:..|.||.|.|||..|..:|.:.|.:|.:
Zfish   794 PMDCTQIMRNGNMESGVYTIYVNNNRSRTMQVYCDMKTDGGGWIVFQRRNTGKVDFMKKWRDYMK 858

  Fly   125 GFGELSGEFFMGLEKLHFLT-TAEPYELFVYMEDFNGVVHD---ARYEDFAIGNASASYALSVLG 185
            |||||:.||::||:|:|.|| |...||....:    |...|   |.|::|.:..:...:.|:: |
Zfish   859 GFGELTEEFWLGLDKIHELTNTPTQYEARFDL----GSGSDRKYAVYDNFKVAPSKQKFKLTI-G 918

  Fly   186 KYSGDAGDSLRYHKGMPFSTFDHD-DTGHG-CARIYVGAWWYDQCQRSNLNGQYLEGGRFEPKMS 248
            .|.|:|||::.||:|.||||.|.| |...| ||..:.|||||..|..:|||      |||.....
Zfish   919 SYKGNAGDAMTYHQGAPFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLN------GRFGDNRH 977

  Fly   249 GRGITWMSWRGYDYGYKFVQMMIRPKCSNNLRRQGMQNALNAH 291
            ..|:.|..|:|:.....|.::.|||..:...:::.::..:.|:
Zfish   978 SMGVNWEPWKGHLQSLDFAEIKIRPVGAAGRQKRSLKRRVAAY 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30281NP_726164.1 FReD 63..274 CDD:238040 82/219 (37%)
tnnXP_005171321.1 EGF_alliinase <133..163 CDD:398501
EGF_Tenascin 163..190 CDD:480934
EGF_Tenascin 194..221 CDD:480934
EGF_Tenascin 225..252 CDD:480934
fn3 257..333 CDD:394996
fn3 347..426 CDD:394996
FN3 405..818 CDD:442628 7/23 (30%)
FReD 792..1003 CDD:238040 82/219 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.