DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30281 and Fgb

DIOPT Version :10

Sequence 1:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_064456.2 Gene:Fgb / 24366 RGDID:2604 Length:479 Species:Rattus norvegicus


Alignment Length:300 Identity:94/300 - (31%)
Similarity:147/300 - (49%) Gaps:49/300 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SNKLDLVYKKAESMVSSLKIRLEELKQSYKEITEERGSHETINPSSCLAAG------INSNG--- 77
            ::.:.|..:...|::..|:.::::|:......||...:..|:|.:..:.:|      |...|   
  Rat   176 NDNIPLNLRVLRSILEDLRSKIQKLESDISAQTEYCHTPCTVNCNIPVVSGKECEEIIRKGGETS 240

  Fly    78 -IHVIEV-PGLEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQGFGE------------ 128
             :::|:. ...:|:.||||.:....||||||.|||||.:|.|.|:.|.:|||.            
  Rat   241 EMYLIQPDTSSKPYRVYCDMKTENGGWTVIQNRQDGSVDFGRKWDPYKKGFGNIATNEDTKKYCG 305

  Fly   129 LSGEFFMGLEKLHFLTTAEPYELFVYMEDFNGVVHDARYEDFAIGNASASYALSVLGKYSGDAGD 193
            |.||:::|.:|:..||...|.||.:.|||:.|....|.|..|.:...:..|.:|| .||.|.||:
  Rat   306 LPGEYWLGNDKISQLTRIGPTELLIEMEDWKGDKVKAHYGGFTVQTEANKYQVSV-NKYKGTAGN 369

  Fly   194 SL--------------RYHKGMPFSTFDHDDTG-------HGCARIYVGAWWYDQCQRSNLNGQY 237
            :|              ..|.||.|||:|.|:.|       ..|::...|.|||::|..:|.||:|
  Rat   370 ALMEGASQLVGENRTMTIHNGMFFSTYDRDNDGWVTTDPRKQCSKEDGGGWWYNRCHAANPNGRY 434

  Fly   238 LEGGRFEPKMSGR----GITWMSWRGYDYGYKFVQMMIRP 273
            ..||.:...||..    |:.||:|:|..|..:.:.|.|||
  Rat   435 YWGGLYSWDMSKHGTDDGVVWMNWKGSWYSMRRMSMKIRP 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30281NP_726164.1 FReD 63..274 CDD:238040 86/258 (33%)
FgbNP_064456.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..82
Beta-chain polymerization, binding distal domain of another fibrin. /evidence=ECO:0000250 33..35
Fib_alpha 79..222 CDD:462570 8/45 (18%)
Fibrinogen_C 225..474 CDD:395095 84/249 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.