DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30281 and Tnc

DIOPT Version :9

Sequence 1:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_001356140.1 Gene:Tnc / 21923 MGIID:101922 Length:2110 Species:Mus musculus


Alignment Length:227 Identity:89/227 - (39%)
Similarity:128/227 - (56%) Gaps:17/227 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PSSCLAAGIN---SNGIHVIEVPG--LEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQ 124
            |..|..|.:|   ::|::.|.:.|  .:...||||....|.||.|..||::|.|:|||.|:.|:.
Mouse  1890 PRDCSQAMLNGDTTSGLYTIYINGDKTQALEVYCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAA 1954

  Fly   125 GFGELSGEFFMGLEKLHFLTTAEPYELFVYMEDFNGVVHDARYEDFAIGNASASYALSVLGKYSG 189
            |||:...||::||:.|..:|....|||.|.::| :|....|.|:.|::|:|.:.|.|.|.| |||
Mouse  1955 GFGDRREEFWLGLDNLSKITAQGQYELRVDLQD-HGESAYAVYDRFSVGDAKSRYKLKVEG-YSG 2017

  Fly   190 DAGDSLRYHKGMPFSTFDHDDTG--HGCARIYVGAWWYDQCQRSNLNGQYLEGGRFEPKMSGRGI 252
            .||||:.||.|..|||:|.|...  ..||..|.||:||..|.|.||.|:|.:...      .:|:
Mouse  2018 TAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNH------SQGV 2076

  Fly   253 TWMSWRGYDYGYKFVQMMIRPKCSNNL--RRQ 282
            .|..|:|::|..:|.:|.:||....||  ||:
Mouse  2077 NWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRK 2108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30281NP_726164.1 FReD 63..274 CDD:238040 84/215 (39%)
TncNP_001356140.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..91
EGF_2 222..247 CDD:285248
EGF_2 345..372 CDD:285248
EGF_2 377..403 CDD:285248
EGF_2 408..434 CDD:285248
EGF_2 468..496 CDD:285248
EGF_2 504..527 CDD:285248
EGF_2 533..558 CDD:285248
EGF_2 592..620 CDD:285248
FN3 624..710 CDD:238020
fn3 713..793 CDD:333790
FN3 804..891 CDD:238020
fn3 894..976 CDD:333790
fn3 986..1064 CDD:333790
fn3 1075..1147 CDD:333790
fn3 1169..1246 CDD:333790
fn3 1257..1336 CDD:333790
fn3 1348..1417 CDD:333790
fn3 1442..1519 CDD:333790
fn3 1530..1610 CDD:333790
fn3 1620..1699 CDD:333790
fn3 1711..1785 CDD:333790
fn3 1797..1869 CDD:333790
Fibrinogen_C 1889..2098 CDD:278572 84/215 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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