DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30281 and tnn

DIOPT Version :10

Sequence 1:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster
Sequence 2:XP_017949080.2 Gene:tnn / 100491528 XenbaseID:XB-GENE-998034 Length:1109 Species:Xenopus tropicalis


Alignment Length:305 Identity:102/305 - (33%)
Similarity:152/305 - (49%) Gaps:54/305 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SLLSTAQSNKLD---LVYKKAESMVSSLKIRLEELKQSYKEITEERGSHETI------------- 63
            ||..|....|:|   |.|..|:.  |:.:|:|:...:|:.....::|...|:             
 Frog   819 SLTWTPPRAKIDGYILTYTDADG--STEEIQLDSSSKSFAMKNLKKGLKYTVYLTAFKGDSRSSQ 881

  Fly    64 -------------NPSSCLAAGINSN---GIHVIEVPG---LEPFPVYCDTRLAGSGWTVIQRRQ 109
                         :||.|:...::.|   |::.| .||   .:...||||....|.||.|.|||.
 Frog   882 ASTIFSTVAFIITHPSDCIQIQLSGNRQSGVYTI-YPGGDTAKGVRVYCDQETDGGGWIVFQRRN 945

  Fly   110 DGSENFYRCWEEYSQGFGELSGEFFMGLEKLHFLTTA--EPYELFVYMEDFNGVVHDARYEDFAI 172
            .|..:||:.|..|.:|||:.|.||::|||.:|.||::  ..||:.|.:...:..|: |.|.:|.:
 Frog   946 SGKLDFYQRWRTYVEGFGDPSDEFWLGLEWIHKLTSSPGNNYEIRVDLRAGDESVY-AFYRNFRV 1009

  Fly   173 GNASASYALSVLGKYSGDAGDSLRYHKGMPFSTFDHDD--TGHGCARIYVGAWWYDQCQRSNLNG 235
            |::...|.||: ..|||.|||.|.||.|..|||:|.|:  ....||..:.||:||..|..:||||
 Frog  1010 GSSKDRYKLSI-SDYSGTAGDGLTYHNGWKFSTWDKDNDIALTNCALSHRGAFWYKNCHLANLNG 1073

  Fly   236 QYLEGGRFEPKMSGRGITWMSWRGYDYGYKFVQMMIRPKCSNNLR 280
            ||.|.|.      .:|:.|..|:|:::...||:|.:||    ||:
 Frog  1074 QYGETGH------SQGVNWEPWKGHEFSVPFVEMKMRP----NLK 1108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30281NP_726164.1 FReD 63..274 CDD:238040 85/246 (35%)
tnnXP_017949080.2 EGF_CA 161..194 CDD:238011
EGF_Tenascin 355..382 CDD:480934
fn3 449..513 CDD:394996
fn3 543..619 CDD:394996
FN3 599..1043 CDD:442628 74/228 (32%)
FReD 895..1105 CDD:238040 84/218 (39%)
Blue background indicates that the domain is not in the aligned region.

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