DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30281 and tnca

DIOPT Version :10

Sequence 1:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster
Sequence 2:XP_068077498.1 Gene:tnca / 100149028 ZFINID:ZDB-GENE-130530-849 Length:2336 Species:Danio rerio


Alignment Length:228 Identity:95/228 - (41%)
Similarity:127/228 - (55%) Gaps:17/228 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NPSSCLAAGIN---SNGIHVIEVPGLE--PFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYS 123
            :|..|..|.:|   |:|.:.|.:.|.|  |..||||....|.||.:..|||.|..||||.|..||
Zfish  2115 HPRDCSEALLNGETSSGPYTIYINGDEKQPLRVYCDMTTDGGGWMLFLRRQSGKLNFYRNWRNYS 2179

  Fly   124 QGFGELSGEFFMGLEKLHFLTTAEPYELFVYMEDFNGVVHDARYEDFAIGNASASYALSVLGKYS 188
            .|||:.|.||::||..||.:|.|:.||:.|.:.|.:..|. |.|:.|.||:..:.|.:.: |.||
Zfish  2180 AGFGDTSDEFWLGLSNLHKITAAKQYEIRVDLRDGSETVF-AVYDRFYIGDPRSRYKIQI-GAYS 2242

  Fly   189 GDAGDSLRYHKGMPFSTFDHDD--TGHGCARIYVGAWWYDQCQRSNLNGQYLEGGRFEPKMSGRG 251
            |.|||||.||:..||||:|.|:  ....||..|.||:||..|.|.||.|:|.:...      .:|
Zfish  2243 GTAGDSLTYHQNRPFSTYDSDNDIAITNCALSYKGAFWYKNCHRVNLMGKYGDSSH------SKG 2301

  Fly   252 ITWMSWRGYDYGYKFVQMMIRPKCSNNL--RRQ 282
            |.|..|:|:::...|.:|.|||....||  ||:
Zfish  2302 INWFHWKGHEHSIPFAEMKIRPANFRNLEGRRK 2334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30281NP_726164.1 FReD 63..274 CDD:238040 90/216 (42%)
tncaXP_068077498.1 EGF_Tenascin 191..218 CDD:480934
EGF_Tenascin 253..280 CDD:480934
EGF_Tenascin 315..342 CDD:480934
EGF_Tenascin 377..404 CDD:480934
EGF_Tenascin 408..434 CDD:480934
EGF_Tenascin 439..466 CDD:480934
C_rich_MXAN6577 449..578 CDD:469225
EGF_Tenascin 470..497 CDD:480934
FN3 593..679 CDD:238020
fn3 682..763 CDD:394996
FN3 742..1122 CDD:442628
FN3 1087..1171 CDD:238020
fn3 1210..1289 CDD:394996
fn3 1301..1376 CDD:394996
fn3 1392..1464 CDD:394996
FN3 1486..1570 CDD:238020
fn3 1574..1649 CDD:394996
fn3 1665..1740 CDD:394996
fn3 1756..1829 CDD:394996
fn3 1846..1925 CDD:394996
fn3 1935..2013 CDD:394996
fn3 2023..2096 CDD:394996
FReD 2114..2323 CDD:238040 89/215 (41%)
Blue background indicates that the domain is not in the aligned region.

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