DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG30281 and XB5954422

DIOPT Version :9

Sequence 1:	NP_726164.1	Gene:	CG30281 / 246525	FlyBaseID:	FBgn0050281	Length:	291	Species:	Drosophila melanogaster
Sequence 2:	NP_001120041.1	Gene:	XB5954422 / 100145014	XenbaseID:	XB-GENE-5954423	Length:	365	Species:	Xenopus tropicalis

Alignment Length:	241	Identity:	90/241 - (37%)
Similarity:	125/241 - (51%)	Gaps:	18/241 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    48 QSYKEITEERGSHETINPS--------SCL---AAGINSNGIHVIEVPGLEPFPVYCDTRLAGSG 101
            :.|:....|:|.......|        :|:   .:|:...|.:.|...|.:|..|.||....|.|
Frog   128 KGYQGTKGEKGDQGAKGASGLGYKAARNCMELRESGLVFTGWYTIYPDGNKPLVVLCDMDTDGGG 192

  Fly   102 WTVIQRRQDGSENFYRCWEEYSQGFGELSGEFFMGLEKLHFLTTAEPYELFVYMEDFNGVVHDAR 166
            |.|.|||||||.:|||.|:.|.||||....||::|.|.:|.||::..::|...:|||:.....|.
Frog   193 WIVFQRRQDGSVDFYRDWKSYKQGFGSQQSEFWLGNENIHLLTSSGNFQLRFDLEDFDNNRTYAT 257

  Fly   167 YEDFAIGNASASYALSVLGKYS-GDAGDSLRYHKGMPFSTFD-HDDTG-HGCARIYVGAWWYDQC 228
            |..|.:...|..|.|. .|::: |.|||||..|:.:||||.. |::.| ..||..|.|||||.:|
Frog   258 YSQFRLEGESQKYTLR-FGEFTGGTAGDSLSTHRNLPFSTKGVHNNAGTANCAETYKGAWWYSRC 321

  Fly   229 QRSNLNGQYLEGGRFEPKMSGRGITWMSWRGYDYGYKFVQMMIRPK 274
            ..|.|||:|..|.  ....|| |:.|.::||..|..|..:|..||:
Frog   322 YSSCLNGEYRRGA--HDSKSG-GVHWNTFRGVSYSLKVSEMKFRPE 364

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG30281	NP_726164.1	FReD	63..274	CDD:238040	86/224 (38%)
XB5954422	NP_001120041.1	Collagen	45..102	CDD:189968
		Collagen	84..142	CDD:189968	3/13 (23%)
		FReD	154..363	CDD:238040	84/212 (40%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1035379at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010