DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30278 and Slco1c1

DIOPT Version :9

Sequence 1:NP_001286710.1 Gene:CG30278 / 246523 FlyBaseID:FBgn0050278 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_445893.1 Gene:Slco1c1 / 84511 RGDID:628660 Length:716 Species:Rattus norvegicus


Alignment Length:19 Identity:7/19 - (36%)
Similarity:10/19 - (52%) Gaps:1/19 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ENSCRRW-IKKNWVDGPCK 22
            :.||.:| .||....|.|:
  Rat   617 DTSCLKWGFKKCGSRGSCR 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30278NP_001286710.1 None
Slco1c1NP_445893.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
OATP 44..642 CDD:281175 7/19 (37%)
MFS 46..>459 CDD:119392
KAZAL_SLC21 476..529 CDD:238650
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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