DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30278 and Slco1a3

DIOPT Version :9

Sequence 1:NP_001286710.1 Gene:CG30278 / 246523 FlyBaseID:FBgn0050278 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_110464.2 Gene:Slco1a3 / 80899 RGDID:621387 Length:670 Species:Rattus norvegicus


Alignment Length:110 Identity:26/110 - (23%)
Similarity:39/110 - (35%) Gaps:43/110 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 KPTY-KHSVILDNNTIVGRCFPMKFQLRRTKKNCL----DCGNELYYRYPITNNSDLLLIKNC-- 184
            ||.| :::|:.|.||   ||            :||    |         |:..::.|..:..|  
  Rat   427 KPLYLENNVLADCNT---RC------------SCLTKTWD---------PVCGDNGLAYMSACLA 467

  Fly   185 -CEVEVYPAKKVENMNNVRVTKISGVKKFANS-----LLKEHSEC 223
             ||      |.|....|:.....|.::...||     |..:..||
  Rat   468 GCE------KSVGTGTNMVFHNCSCIQSPGNSSAVLGLCNKGPEC 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30278NP_001286710.1 None
Slco1a3NP_110464.2 oat 1..625 CDD:273279 26/110 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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