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Protein Alignment CG30278 and slco1c1
DIOPT Version :9
Sequence 1: | NP_001286710.1 |
Gene: | CG30278 / 246523 |
FlyBaseID: | FBgn0050278 |
Length: | 275 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005164528.1 |
Gene: | slco1c1 / 562772 |
ZFINID: | ZDB-GENE-041210-50 |
Length: | 710 |
Species: | Danio rerio |
Alignment Length: | 88 |
Identity: | 16/88 - (18%) |
Similarity: | 24/88 - (27%) |
Gaps: | 44/88 - (50%) |
- Green bases have known domain annotations that are detailed below.
Fly 88 CCTMCVAQEQNLHP----------NLCSAQCRPLKTYLHLNEWTKRPLPKPTYKHSVILDNNTIV 142
|...|...|:|..| :.|.|.||. .|...:| |:.
Zfish 474 CNAACHCPEKNWDPVCGEDGLTYVSPCLAGCRT--------------------SHGSGMD--TVF 516
Fly 143 GRCFPMKFQLRRTKKNCLDCGNE 165
.:| :|:..||:
Zfish 517 EQC------------SCIGVGNQ 527
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG30278 | NP_001286710.1 |
None |
slco1c1 | XP_005164528.1 |
OATP |
48..631 |
CDD:281175 |
16/88 (18%) |
MFS |
50..461 |
CDD:119392 |
|
KAZAL_SLC21 |
470..523 |
CDD:238650 |
14/82 (17%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3626 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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