DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30278 and Slco5a1

DIOPT Version :10

Sequence 1:NP_726180.1 Gene:CG30278 / 246523 FlyBaseID:FBgn0050278 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001423667.1 Gene:Slco5a1 / 312907 RGDID:1307132 Length:850 Species:Rattus norvegicus


Alignment Length:165 Identity:35/165 - (21%)
Similarity:56/165 - (33%) Gaps:34/165 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SCRRWIKKNWVDGPCKKCFESTCGPCIDYRVSPPAADL--PEPQAEVVKAVIEPDGPVRQEINIR 69
            |||:.:.....||..........|    ::.:.|..:|  |.|.|....|     |...:.:   
  Rat    44 SCRQNLSAGNADGKLALGSIEASG----HQETHPGRNLIVPSPSAPSTSA-----GTTTELM--- 96

  Fly    70 AECSKGRPLLESDKDKLRCCTMCVAQEQN-----LHPNLCSAQCRPLKTYLHLNEWTKRPLPKPT 129
             :|:..|   :..|......|:...||:.     |..:.|...|....|::       :.|....
  Rat    97 -DCNHRR---DPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFI-------QALMVSG 150

  Fly   130 YKHSVILDNNTIVGRCFPMKFQLRRTKKNCLDCGN 164
            |..|||    |.:.|.:.:|........:|.|.||
  Rat   151 YLSSVI----TTIERRYSLKSSESGLLVSCFDIGN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30278NP_726180.1 None
Slco5a1NP_001423667.1 MFS_SLCO5_OATP5 131..676 CDD:340962 15/62 (24%)

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