DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30278 and Slco2b1

DIOPT Version :9

Sequence 1:NP_001286710.1 Gene:CG30278 / 246523 FlyBaseID:FBgn0050278 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_006229783.1 Gene:Slco2b1 / 140860 RGDID:621391 Length:693 Species:Rattus norvegicus


Alignment Length:182 Identity:41/182 - (22%)
Similarity:59/182 - (32%) Gaps:48/182 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GPCIDYRVSPPAADLPEPQAEVVKAVIEPDGPVRQEINIRAECSKGRPLLES-DKDKL---RCCT 90
            ||.:....|.|.:    .|::....|.:....|.......|.|: ||.:.|: ||.::   .|  
  Rat   481 GPSLFPGCSEPCS----CQSDDFNPVCDTSAYVEYTTPCHAGCT-GRVVQEALDKSQVFYTNC-- 538

  Fly    91 MCVAQEQNLHPNLCSAQCR----PLKTYLHLNEWTKRPLPKPTYKHSVIL------DNNTIVGRC 145
            .|||....:....|.:.|.    |....:.|..........|::  .:||      |....||  
  Rat   539 SCVAGNGTISAGSCESACSRLVLPFILLISLGAAVASITHTPSF--MLILRGVKKEDKTLAVG-- 599

  Fly   146 FPMKFQLRRT--------------KKNC----LDCGNELYYRYPITNNSDLL 179
              |:|.|.|.              ...|    |.||.....||   .:.|||
  Rat   600 --MQFMLLRVLAWMPSPVIHGSAIDTTCVHWALTCGRRAVCRY---YDHDLL 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30278NP_001286710.1 None
Slco2b1XP_006229783.1 OATP 52..646 CDD:281175 39/180 (22%)
MFS 58..>301 CDD:119392
KAZAL_SLC21 484..541 CDD:238650 13/63 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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