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Protein Alignment CG30278 and Slco2b1
DIOPT Version :9
Sequence 1: | NP_001286710.1 |
Gene: | CG30278 / 246523 |
FlyBaseID: | FBgn0050278 |
Length: | 275 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006229783.1 |
Gene: | Slco2b1 / 140860 |
RGDID: | 621391 |
Length: | 693 |
Species: | Rattus norvegicus |
Alignment Length: | 182 |
Identity: | 41/182 - (22%) |
Similarity: | 59/182 - (32%) |
Gaps: | 48/182 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 GPCIDYRVSPPAADLPEPQAEVVKAVIEPDGPVRQEINIRAECSKGRPLLES-DKDKL---RCCT 90
||.:....|.|.: .|::....|.:....|.......|.|: ||.:.|: ||.:: .|
Rat 481 GPSLFPGCSEPCS----CQSDDFNPVCDTSAYVEYTTPCHAGCT-GRVVQEALDKSQVFYTNC-- 538
Fly 91 MCVAQEQNLHPNLCSAQCR----PLKTYLHLNEWTKRPLPKPTYKHSVIL------DNNTIVGRC 145
.|||....:....|.:.|. |....:.|..........|:: .:|| |....||
Rat 539 SCVAGNGTISAGSCESACSRLVLPFILLISLGAAVASITHTPSF--MLILRGVKKEDKTLAVG-- 599
Fly 146 FPMKFQLRRT--------------KKNC----LDCGNELYYRYPITNNSDLL 179
|:|.|.|. ...| |.||.....|| .:.|||
Rat 600 --MQFMLLRVLAWMPSPVIHGSAIDTTCVHWALTCGRRAVCRY---YDHDLL 646
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG30278 | NP_001286710.1 |
None |
Slco2b1 | XP_006229783.1 |
OATP |
52..646 |
CDD:281175 |
39/180 (22%) |
MFS |
58..>301 |
CDD:119392 |
|
KAZAL_SLC21 |
484..541 |
CDD:238650 |
13/63 (21%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3626 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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