DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS1 and cima-1

DIOPT Version :9

Sequence 1:NP_726254.1 Gene:MFS1 / 246519 FlyBaseID:FBgn0050272 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001294208.1 Gene:cima-1 / 24104589 WormBaseID:WBGene00018473 Length:543 Species:Caenorhabditis elegans


Alignment Length:432 Identity:113/432 - (26%)
Similarity:185/432 - (42%) Gaps:25/432 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NAGVAVVAMTNAENTNPNFPEY------DWNEMERSYILSSFFWGYILTQFMGGWLCRRYGARIT 92
            |..||::.||:.       |.:      :|...:...:|::...|.::....|.|..|..| :..
 Worm    87 NLAVALICMTSC-------PVHGYGGTLEWQSQQEGLVLAAQNAGSLIMIVTGMWADRLNG-KWM 143

  Fly    93 MFVSTIGSALLVVLIPWCVSWGGWQAYCAIRMSMGLFQGFLFPCIHAHLANWCPVKERNRLGALA 157
            :|:..:...:..:::|...|...|.|..| |:|:|.....|.|.:::.:..|.|..||.....|.
 Worm   144 VFIGLLLCCIGNLMLPLLASKSFWFAVLA-RISIGASDACLMPAVNSLITRWFPQAERPAAIGLI 207

  Fly   158 NTGIDCGTLVAMFASGLLAASS---IGWPGIFYVSCGVGVLWCIVWWIFGANQPRESKFIGEAEL 219
            :.|...|||..:..:|.|....   .|||.|||:|..:.||..:.|..|||::|.:...|...|.
 Worm   208 SGGRQIGTLFILPTAGYLCTRKDILDGWPAIFYLSATISVLVTVFWIPFGADKPAKQICISSREK 272

  Fly   220 NYIETSINSSRKAEEAELKATGPIPVPWKAIWTSVPFWALMVTRCCQSWGYSTLQTEMPAYMNGV 284
            .:|||.|    ..|....:......||:.|:..|.|.||.:....|..:....:...:|.||..|
 Worm   273 EFIETRI----ACESIGKRTDRTRRVPYGAMLHSKPLWACIFALICHEYPLVIMLQFLPNYMRDV 333

  Fly   285 LLMDMKSNALYSALPYLTSWVMAFVYLIIADILLTRGIMSITGIRKSVNSIAFFVPAAALIGVSF 349
            |......|.:.:|||.|..::.......::..|.|:..:..|.:.|..|::|....|..:..|.|
 Worm   334 LEFAPTKNGIIAALPILCLFLSKTFSSSLSSYLTTKLRLDKTFVCKGFNAVASAGLAICISFVPF 398

  Fly   350 LDNTQKTLAVVLMCANVGINAG-STIGSTINTIDLSPNHAGILMGIVNTASNIVPILTPLLVGII 413
            .:.....|||..:|..: |.|| .|.|.....:.::|..:||:.|....|.....|...:|...|
 Worm   399 FNKESAFLAVFCLCGAM-IFAGLHTPGVITAMVQIAPAFSGIITGWSFFAVAWFSIGNKILTKYI 462

  Fly   414 VKDDHDREQWQIVFIISAVIFCVGNIVYVAFGKMVNQPWDAP 455
            |:.....| |.:||.:||::..:..||:..:|....:.|.||
 Worm   463 VQSGSVTE-WGMVFRVSALVAALPVIVFTIWGSADREWWAAP 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS1NP_726254.1 MFS 18..444 CDD:119392 109/419 (26%)
2A0114euk 19..456 CDD:129972 113/432 (26%)
cima-1NP_001294208.1 2A0114euk 63..506 CDD:129972 113/432 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4312
OMA 1 1.010 - - QHG28615
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.880

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