DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS1 and slc-17.9

DIOPT Version :9

Sequence 1:NP_726254.1 Gene:MFS1 / 246519 FlyBaseID:FBgn0050272 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001379067.1 Gene:slc-17.9 / 181189 WormBaseID:WBGene00011643 Length:516 Species:Caenorhabditis elegans


Alignment Length:500 Identity:124/500 - (24%)
Similarity:203/500 - (40%) Gaps:64/500 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TFLLFLSIVVNYMAKFNAGVAVVAMTNAENTNPNFP---------------EYDWNEMERSYILS 67
            :|||.|..|...:...|...::|.|....:||...|               ::.|:.:::..|.|
 Worm    25 SFLLCLCFVALAIGTSNISQSMVCMVKKPDTNYTCPLAEPEVEAIPCNHPKQFAWSSIQQGLIYS 89

  Fly    68 SFFWGYILTQFMGGWLCRRYGARITMFVSTIGSALLVV---LIPWCVSWG-GWQAYCAIRMSMGL 128
            ...:| .|...:.||...|...:.|:..:   .|.::|   ::|  :|.| .:.....:|:..|.
 Worm    90 GQNFG-SLFMVITGWQADRLNGKWTIVAA---MAFIIVSNAVLP--ISAGASFALVFFLRVLTGF 148

  Fly   129 FQGFLFPCIHAHLANWCPVKERNRLGALANTGIDCGTLVAMFASGLLAASS-----IGWPGIFYV 188
            ....|.|...:.:..|.|.|||.....:..:|...|||:.:...|.|..|.     .|||.|||:
 Worm   149 GDALLSPASSSLITRWFPPKERPSALGIVTSGRQIGTLIILPIGGWLCGSDGSKFLGGWPAIFYL 213

  Fly   189 SCGVGVLWCIVWWIFGANQPRESKFIGEAELNYIETSINSSRKAEEAEL-KATGPIPVPWKAIWT 252
            |..|.....::|.:|.|::|.:...|...|..||      :||.||..: |.......|||||:|
 Worm   214 SSVVAAAVLVIWVVFSADKPSKHLCISHNEEAYI------NRKIEEENIGKRNNRKNTPWKAIFT 272

  Fly   253 SVPFWALMVTRCCQSWGYSTLQTEMPAYMNGVLLMDMKSNALYSALPYLTSWVMAFVYL------ 311
            |...|..:....|..:....:...:|.:.:.||.:....|.|.||||      ||.::|      
 Worm   273 SKQVWVAVAALVCHEFPLVIMLQFLPKFFSDVLGLSNTVNGLVSALP------MAILFLSKCLSA 331

  Fly   312 IIADILLTRGIMSITGIRKSVNSIAFFVPAAALIGVSFLDNTQKTL-AVVLMC---ANVGINAGS 372
            .:|..|...|.:..|...|..|.||.......:.....:.|.|..: |::::|   |..|::   
 Worm   332 SLASYLTANGYLRKTQSCKIFNFIASLGLGICIAATPLMSNLQHAIWAIIILCLANAFAGLH--- 393

  Fly   373 TIGSTINTIDLSPNHAGILMGIVNTASNIVPILTPLLVGIIVKDDHDREQWQIVFIISAVIFCVG 437
            |.|.....:.|:|..:||:.|:....::...|...||:..|::.. .:.:|.|||.|||.:..:.
 Worm   394 TPGVLTAIVQLAPAFSGIITGLAFAVASCFSIFNKLLISQILRTG-SKHEWTIVFEISAFVAILP 457

  Fly   438 NIVYVAFGKMVNQPW-----DAPDFMDKQRSSNLQEVGHSKALEA 477
            .|.:..:|......|     ..|  .|..:.||......|..::|
 Worm   458 TIFFTLWGSAERTEWASNRVSVP--KDADQKSNDSGSSTSSTIQA 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS1NP_726254.1 MFS 18..444 CDD:119392 116/460 (25%)
2A0114euk 19..456 CDD:129972 118/476 (25%)
slc-17.9NP_001379067.1 2A0114euk 5..474 CDD:129972 118/470 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4312
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.870

Return to query results.
Submit another query.