DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30203 and fat-spondin

DIOPT Version :9

Sequence 1:NP_725128.2 Gene:CG30203 / 246514 FlyBaseID:FBgn0050203 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_477435.1 Gene:fat-spondin / 36919 FlyBaseID:FBgn0026721 Length:763 Species:Drosophila melanogaster


Alignment Length:863 Identity:256/863 - (29%)
Similarity:370/863 - (42%) Gaps:174/863 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRHIVLLILLSSEVRGVCNRIPQGAS-GPRSPVDDNFKILIDGNPETYVPEHQYN-VSLSCPIN 63
            :|..::::|.|:..:...|.|.|...: |.|:..|:.:|:::...|..|||...|| :.|....:
  Fly     7 LLIRLIVVIWLTISMVTACPRAPTHLNHGRRTRGDNGYKLIVADGPNGYVPGKTYNLLLLGSRTH 71

  Fly    64 MK---FVSFTLVVEAED----PSAAFGGQDMTGHFELLGVGDTRFSTSCENMVENTNTNAKIYIA 121
            :|   |..||:..||..    |.||  .....|.|:|.....|:|:..|.|.|...:...|..:.
  Fly    72 LKVQHFTHFTITAEAHTGARRPQAA--SPRRVGRFQLFSDSLTQFNDRCVNTVSEADDLPKTEVQ 134

  Fly   122 VSWIAPRNPDSGCVLIKAGVVQHRDVWFLDDGFLTKRICPEEIDELNSLTPPLETCCACDEAKYE 186
            |.|:||.: .||||.:.|.|.:....||.|||.|:..||..:.|    .....:.|||||||||.
  Fly   135 VMWVAPES-GSGCVSLSAMVYEGPRAWFADDGNLSTVICERKPD----AAAAQKECCACDEAKYS 194

  Fly   187 IVLERKWARNTHWKDFPSEDWRTRLGEVIGASHSHSYRYWAYGGRASKGMKELAEHGATRTLENE 251
            .|.|..|:..||.||:|...|.|...:||||||..::.:|.....|:.|.:.|||.|:...||.|
  Fly   195 FVFEGIWSNETHPKDYPFAIWLTHFSDVIGASHESNFSFWGENHIATAGFRSLAEWGSPAALETE 259

  Fly   252 IRENTQNGEVRTIIKAPGIPYRPKTFGTTLANARLDPVHHQISLAAKIDPSPDWILGVAGLELCL 316
            :|.|  ..::||:|||.|:.| |.....|.:..|:|..|.::||.:...|||||::|::||:||.
  Fly   260 LRAN--GPKLRTLIKAAGLWY-PNVNQNTSSKFRVDRKHPKVSLVSMFGPSPDWVVGISGLDLCT 321

  Fly   317 SNCTWLERKVLNLYPWDIGTDSGPSYMSSDEPQVPPDVVRRITSSYPSDHRSPFYDDTGAPMKPL 381
            .:|:|.|....:|:|||.|||||.||||.:....||:.:.|||:.||.|.|:|||:.....|.||
  Fly   322 EDCSWKESMDFDLFPWDAGTDSGISYMSPNSETQPPERMYRITTMYPEDPRAPFYNPKSREMTPL 386

  Fly   382 ATLYLTRKKLYIRECEE--------------VPQEGPLECAVHPWNEWTNCSTRCGQGYSHRQRS 432
            |.|||.|:|:..|.|::              ..|:...||.|..::.|:.||..||:|...|.|.
  Fly   387 AKLYLRREKIVSRNCDDEFLQALQLEVSDDAEEQDTRAECRVGDYSAWSPCSVSCGKGIRMRSRQ 451

  Fly   433 FKNPNLAANFNCDRRLEEFRQCQGT--QC--GAAEEELEGEEPGLGMENPPS-SGSMAE----CQ 488
            :..|..|....|.|:|.....|...  :|  |.|:.:...::.|..:.|..| .||..|    |:
  Fly   452 YLYPAAADQNKCARQLVAKEMCVAAIPECADGPAQSKDRDDDEGENLANSQSLVGSNGEGAGLCK 516

  Fly   489 LTNWGEWSPCTKTCGRGSSTRTRDYYNPQARQRCLSVMRIPLEETRECIGSDCGGTIPDNGELDG 553
            .:.|..||.|:.:||.|.:.|||.:.|...|:||   ..|.:.|..:|:..||      ..|...
  Fly   517 TSPWSVWSECSASCGIGITMRTRTFVNHLGRKRC---PHITIVEKNKCMRPDC------TYEQVE 572

  Fly   554 FPEPDVFGETDHGGYMGKTTSWNSKQEHSSLGSGNQAWNRKPYNSWKDKSLSNPRDNAQESPNLP 618
            .|:|..                                   |.:.|.|                 
  Fly   573 LPDPQC-----------------------------------PTSQWSD----------------- 585

  Fly   619 FDQIENPQRPAYNPSDNMGGYDKGFPPTNSYSNDKLVGNRPGYNDFNSDYNNKDAYNDYTTPSFT 683
                       ::|..:..|  :|   ....:...|:.|.|          :|:        |.|
  Fly   586 -----------WSPCSSTCG--RG---VTIRTRLLLLENGP----------DKE--------SCT 616

  Fly   684 SRTPFGSRYPNQQETVEGNTNDINGNYNVVQDYCFEKPYASTLPCFAKPVVESNY--WFYDHEDH 746
            .|    .....|:|.|  |..|.:.|....:|.|.:.|...  ||      ...|  :.||.::.
  Fly   617 QR----MELHQQKECV--NPIDCHINAEQAKDICVQAPDPG--PC------RGTYMRYAYDPQNQ 667

  Fly   747 ECKIFTTDNCDQNRNRFRTLTACEGTCLQPQINMERSENDAMDLYGRRSYDQKQ-------TRGR 804
            .|..||...|..|||.|.|...|..||     |:.||.      |..| .||.:       :...
  Fly   668 HCYSFTYGGCRGNRNNFLTENDCLNTC-----NVLRSP------YSSR-VDQPRACVLSDWSVWS 720

  Fly   805 PYDQTSGIAYGQTEGRSY 822
            |...:.|:  |.:|.|.|
  Fly   721 PCSVSCGV--GVSESRRY 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30203NP_725128.2 Reeler 18..160 CDD:260081 48/150 (32%)
Spond_N 183..372 CDD:283999 82/188 (44%)
TSP1 411..459 CDD:214559 14/49 (29%)
TSP1 492..541 CDD:214559 17/48 (35%)
KU <739..773 CDD:197529 12/33 (36%)
fat-spondinNP_477435.1 Reeler 24..172 CDD:260081 48/150 (32%)
Spond_N 191..378 CDD:283999 83/189 (44%)
TSP1 428..473 CDD:214559 14/44 (32%)
TSP1 518..566 CDD:214559 17/50 (34%)
TSP1 581..627 CDD:214559 13/100 (13%)
Kunitz_BPTI 643..694 CDD:278443 17/58 (29%)
TSP1 714..763 CDD:214559 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 186 1.000 Domainoid score I3283
eggNOG 1 0.900 - - E1_KOG3539
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 381 1.000 Inparanoid score I2015
Isobase 1 0.950 - 0 Normalized mean entropy S5564
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 1 1.000 - - FOG0003147
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104958
Panther 1 1.100 - - P PTHR11311
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2543
109.820

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