DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30203 and CG17739

DIOPT Version :10

Sequence 1:NP_725128.2 Gene:CG30203 / 246514 FlyBaseID:FBgn0050203 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_610757.1 Gene:CG17739 / 36333 FlyBaseID:FBgn0033710 Length:873 Species:Drosophila melanogaster


Alignment Length:934 Identity:365/934 - (39%)
Similarity:498/934 - (53%) Gaps:153/934 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLLILLS--SEVRGVCNRIPQGASGPRSPVDDNFKILIDGNPETYVPEHQYNVSLSCPINMKFVS 68
            :||.|:.  ..:.| |.|:|.|.:..:||||||:.:.::||.::|||..:||||||....:.|:|
  Fly     9 ILLALVGVIPRIEG-CIRVPPGVTAAKSPVDDNYVLSVNGNTQSYVPGQRYNVSLSAFSGLSFIS 72

  Fly    69 FTLVVEAEDPSAAFGGQDMTGHFELLGVGDTRFSTSCENMVENTNTNAKIYIAVSWIAPRNPDSG 133
            |.|.::.|..... |..:..|.:|:..:.:||||..|.|:|||||||.|..:.|.|:||.:|..|
  Fly    73 FMLALDLESGDGD-GDANALGTWEIADLAETRFSPRCPNLVENTNTNVKTRVDVFWVAPSSPGQG 136

  Fly   134 CVLIKAGVVQHRDVWFLDDGFLTKRICPEEIDELNSLTPPLETCCACDEAKYEIVLERKWARNTH 198
            |:|::|.|:|||||||:||||||||:|.||:|::::....::.||||||||||:..|.||:|:||
  Fly   137 CILLRATVMQHRDVWFMDDGFLTKRMCEEEVDDIDTQPSIVDPCCACDEAKYELTFEGKWSRHTH 201

  Fly   199 WKDFPSEDWRTRLGEVIGASHSHSYRYWAYGGRASKGMKELAEHGATRTLENEIRENTQNGEVRT 263
            .||||:..||||..::|||||:..||:|.||..||:|::|:||||:|||||:|:::  |:..:||
  Fly   202 PKDFPANSWRTRFSDIIGASHTLDYRFWQYGELASEGLREVAEHGSTRTLESELKD--QSEHIRT 264

  Fly   264 IIKAPGIPYRPKTFGTTLANARLDPVHHQISLAAKIDPSPDWILGVAGLELCLSNCTWLERKVLN 328
            ||||.||.| |...|.|.|..|:|..||.|||.:.:|||||||:||:||||||.||:|:|.||.|
  Fly   265 IIKARGIAY-PNVTGKTFAVFRVDSNHHLISLVSMVDPSPDWIVGVSGLELCLPNCSWVENKVHN 328

  Fly   329 LYPWDIGTDSGPSYMSSDEPQVPPDVVRRITSSYPSDHRSPFYDDTGAPMKPLATLYLTRKKLYI 393
            |||||.||||||||||:|:|||||||||||.|::|:|.||||||.|||.|||||||::.|::||.
  Fly   329 LYPWDAGTDSGPSYMSADQPQVPPDVVRRIKSNFPNDPRSPFYDPTGAQMKPLATLHINRRRLYE 393

  Fly   394 RECEEVPQEG-PLECAVHPWNEWTNCSTRCGQGYSHRQRSFKNPNLAANFNCDRRLEEFRQCQGT 457
            :.||....|. |.|||.:.|:.|..|:|:||.|..:|.|.||||.||:...|:..|.|.:.|.|.
  Fly   394 KNCESSDSEQVPPECATNSWSRWDECTTKCGPGKQYRIREFKNPALASRHRCNNALREEKNCVGH 458

  Fly   458 QC-GAAEEELEGEEPGLGMENPPSSGSM--AECQLTNWGEWSPCTKTCGRGSSTRTRDYYNPQAR 519
            :| |..||..||.||    |..||.||.  .:|.|::|.|||.||.|||.|..||:|.|.|.:|:
  Fly   459 KCAGFNEETAEGGEP----EVAPSPGSSDDPQCGLSDWSEWSSCTVTCGTGEMTRSRHYLNKKAK 519

  Fly   520 QRCLSVMRIPLEETRECIGSDCGGTIPDNGELDGFPEPDVFGETDHGGYMGKTTSWNSKQEHSSL 584
            ::|....|..|.||:.|...:|||.|.:.|.. |.||.:..| .|.||...|.:.:.:.:.:|. 
  Fly   520 KKCQKASRARLHETKICEAMECGGDIENEGGA-GEPEEEQAG-GDGGGSAEKRSIFRNFESYSQ- 581

  Fly   585 GSGNQAWNRKPY-------NSWKDKSLSNPRDNAQESPNLPFDQIENPQRPAYNPSDNMGGYDKG 642
                   :|:.|       ..|.|.|                        |...|   .||:.| 
  Fly   582 -------HREDYIPPVCGVTPWSDFS------------------------PCMGP---CGGHGK- 611

  Fly   643 FPPTNSYSNDKLVGNRPGYNDFNSDYNNKDAYNDYTTPSFTSRTPFGSRYPNQQETVEGNTNDIN 707
                              .......:||...|. .|.|:...:.|  .|:....|.|    |..|
  Fly   612 ------------------RQRIRKVWNNNQVYG-VTDPNDDGQDP--CRHIKLHEEV----NCTN 651

  Fly   708 GNYN-VVQDYCFEKPYASTLPCFAKPVVESNYWFYDHEDHECKIFTTDNCDQNRNRFRTLTACEG 771
            .:.: :|..:|:::  .:..||....|  :|:|:|||...:|.|:.:|.||.|||:|::...||.
  Fly   652 PSCDTIVPGFCYDE--LTDSPCRDNDV--ANFWYYDHVSDQCAIYWSDRCDTNRNKFKSKEECEE 712

  Fly   772 TCLQPQINMERSENDAMDLYGRRSYDQKQTRGRP------YDQTSGIAYGQTEGRSYDQKVGKSY 830
            ||..|                 |...:.|..|.|      .|..|         .|.:...|..:
  Fly   713 TCRLP-----------------RHKQELQHDGIPAIDCLVSDWVS---------HSCNASCGDGF 751

  Fly   831 DRTFGRSYKQTGGGSYDQPE-----DRSYDLSTGRSYVQPEDRSYDLSRGRSYDQPVGRSYDLAG 890
            .....|..:....|....|:     ||.|         |..|..|.:|                 
  Fly   752 QLRTRRVLRTPKYGGKPCPKHLVRLDRCY---------QRCDDMYSIS----------------- 790

  Fly   891 GRSYGETSEAGDIGEPMSQTRSRY 914
            ||.:||........:|..|...||
  Fly   791 GRGFGERRHVVRAPQPEPQDECRY 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30203NP_725128.2 Reeler 18..160 CDD:260081 68/141 (48%)
Spond_N 183..380 CDD:461924 125/196 (64%)
TSP1_spondin 407..459 CDD:480609 22/51 (43%)
TSP1_spondin 487..541 CDD:465948 24/53 (45%)
PTZ00441 <492..>713 CDD:240420 57/228 (25%)
KU <739..773 CDD:197529 15/33 (45%)
CG17739NP_610757.1 Reeler 23..163 CDD:260081 68/140 (49%)
Spond_N 186..380 CDD:461924 125/196 (64%)
TSP1_spondin 487..>512 CDD:480609 14/24 (58%)
TSP1 490..541 CDD:214559 22/50 (44%)
TSP1_spondin 591..654 CDD:480609 19/115 (17%)
Kunitz-type 662..714 CDD:444694 20/55 (36%)
TSP1_spondin 733..>773 CDD:465948 7/48 (15%)
TSP1_spondin 812..862 CDD:480609 2/3 (67%)

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