DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30203 and SPON1

DIOPT Version :9

Sequence 1:NP_725128.2 Gene:CG30203 / 246514 FlyBaseID:FBgn0050203 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_006099.2 Gene:SPON1 / 10418 HGNCID:11252 Length:807 Species:Homo sapiens


Alignment Length:640 Identity:193/640 - (30%)
Similarity:298/640 - (46%) Gaps:103/640 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GVCNRIPQGASGPRSPVDDNFKILIDGNPETYVPEHQYNVSLSCPINMKFVSFTLVVEAEDPSAA 81
            |.|:||.: |.|.|......|.:.::|:|:.|.|...|.|:||......|..|||:...|:....
Human    42 GYCSRILR-AQGTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPPSYFRGFTLIALRENREGD 105

  Fly    82 FGGQDMTGHFELLGVGDTRFSTSCENMVENTNTNAKIYIAVSWIAPRNPDSGCVLIKAGVVQHRD 146
             ..:|..|.|:::...:|:|.::|...|..:....:..|.|.|||| ...:|||::||.:||.|.
Human   106 -KEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAP-PAGTGCVILKASIVQKRI 168

  Fly   147 VWFLDDGFLTKRICPEEIDELNSLT-PPLETCCACDEAKYEIVLERKWARNTHWKDFP--SEDWR 208
            ::|.|:|.|||::| |:....:.:| .|:..||||..|||.:.....|:..||.||:|  :..| 
Human   169 IYFQDEGSLTKKLC-EQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEKTHPKDYPRRANHW- 231

  Fly   209 TRLGEVIGASHSHSYRYWAYGGRASKGMKELAEHGATRTLENEIRENTQNGEVRTIIKA----PG 269
               ..:||.|||.:|..|.|||.||:|:|::||.|:...:|.|||:  |:.||.|:|||    |.
Human   232 ---SAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSPVKMEEEIRQ--QSDEVLTVIKAKAQWPA 291

  Fly   270 IPYRP-KTFGTTLANARLDPVHHQISLAAKIDPSPDWILGVAGLELCLSNCTWLERKVLNLYPWD 333
              ::| .......|...:|...|.:|....:.|||||.:|::..:||...|.|:::.|.:|.|||
Human   292 --WQPLNVRAAPSAEFSVDRTRHLMSFLTMMGPSPDWNVGLSAEDLCTKECGWVQKVVQDLIPWD 354

  Fly   334 IGTDSGPSYMSSDEPQVPPDVVRRITSSYPSDH-RSPFYDDTGAPMKPLATLYLTRKKLYIRECE 397
            .|||||.:|.|.::|.:|.:.:|.:||   .|| :|||||..|..:..:|.:.:.|......:|.
Human   355 AGTDSGVTYESPNKPTIPQEKIRPLTS---LDHPQSPFYDPEGGSITQVARVVIERIARKGEQCN 416

  Fly   398 EVP-----------------QEGPLECAVHPWNEWTNC-STRCGQGYSHRQRSFKNPNLAANFNC 444
            .||                 .:.|..|....|:.|:.| |:.|.:|...|||..| ..|..:..|
Human   417 IVPDNVDDIVADLAPEEKDEDDTPETCIYSNWSPWSACSSSTCDKGKRMRQRMLK-AQLDLSVPC 480

  Fly   445 DRRLEEFRQCQGTQCGAAEEELEGEEPGLGMENPPSSGSMAECQLTNWGEWSPCTKTCGRGSSTR 509
            . ..::|:.|.|..|        .:|.|            :.|.::.|..||||:.:||.|  .|
Human   481 P-DTQDFQPCMGPGC--------SDEDG------------STCTMSEWITWSPCSISCGMG--MR 522

  Fly   510 TRDYYNPQARQRCLSVMRIPLEETREC-IGSDCGGTIPDNGELDGFPEPDVFGETDHGGYMGKTT 573
            :|:.|..|..:.. ||..:|.|||.:| :..:|.            |...:..|.........|.
Human   523 SRERYVKQFPEDG-SVCTLPTEETEKCTVNEECS------------PSSCLMTEWGEWDECSATC 574

  Fly   574 SWNSKQEHSSL------GSGNQAWNRK-----------------PYNSWKDKSLS 605
            ....|:.|..:      ||..:|...:                 |::.|.|.|::
Human   575 GMGMKKRHRMIKMNPADGSMCKAETSQAEKCMMPECHTIPCLLSPWSEWSDCSVT 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30203NP_725128.2 Reeler 18..160 CDD:260081 47/141 (33%)
Spond_N 183..372 CDD:283999 76/196 (39%)
TSP1 411..459 CDD:214559 15/48 (31%)
TSP1 492..541 CDD:214559 19/49 (39%)
KU <739..773 CDD:197529
SPON1NP_006099.2 Reeler 43..182 CDD:260081 47/141 (33%)
Spond_N 205..392 CDD:310815 77/197 (39%)
TSP_1 446..494 CDD:306574 15/49 (31%)
TSP_1 505..554 CDD:306574 19/51 (37%)
TSP_1 562..610 CDD:306574 7/47 (15%)
TSP_1 618..665 CDD:306574 4/12 (33%)
TSP_1 672..720 CDD:306574
TSP_1 758..807 CDD:306574
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141174
Domainoid 1 1.000 184 1.000 Domainoid score I3413
eggNOG 1 0.900 - - E1_KOG3539
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 394 1.000 Inparanoid score I1976
Isobase 1 0.950 - 0 Normalized mean entropy S5564
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 1 1.000 - - FOG0003147
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104958
Panther 1 1.100 - - O PTHR11311
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2543
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.750

Return to query results.
Submit another query.