DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18853 and trmO

DIOPT Version :10

Sequence 1:NP_724615.1 Gene:CG18853 / 246511 FlyBaseID:FBgn0042173 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_414737.1 Gene:trmO / 949112 ECOCYCID:EG11503 Length:235 Species:Escherichia coli


Alignment Length:67 Identity:26/67 - (38%)
Similarity:38/67 - (56%) Gaps:12/67 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 FRPIGVIRTAFPEKRAVPRQSIVGSRLRGIIQLNDGVF-----TNPEHSLEGLEDFSHLWLIYHF 159
            |..|||||:.:.||.|||||.       |:::..:|..     .|...::.|||.|||||:::.|
E. coli     6 FEQIGVIRSPYKEKFAVPRQP-------GLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVF 63

  Fly   160 HR 161
            |:
E. coli    64 HQ 65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18853NP_724615.1 UPF0066 98..>162 CDD:469902 26/67 (39%)
phr2 <170..322 CDD:129679
trmONP_414737.1 TrmO 3..163 CDD:441326 26/67 (39%)
TrmO_C 159..223 CDD:465738
Blue background indicates that the domain is not in the aligned region.

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