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Protein Alignment CG18853 and trmo
DIOPT Version :9
Sequence 1: | NP_724615.1 |
Gene: | CG18853 / 246511 |
FlyBaseID: | FBgn0042173 |
Length: | 330 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001016423.2 |
Gene: | trmo / 549177 |
XenbaseID: | XB-GENE-1004391 |
Length: | 405 |
Species: | Xenopus tropicalis |
Alignment Length: | 188 |
Identity: | 56/188 - (29%) |
Similarity: | 76/188 - (40%) |
Gaps: | 55/188 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 CANNNKSAKDKVAGEKQEHQHQQQTQDQQTGQGQSNYTNGGHCLGEDYAHFRPIGVIRTAFPEKR 114
|.:.|| :|:|.| .:.| ||:...|..| ..|||.|.:.|..|.
Frog 3 CDDRNK--------KKKEVQ-------PEIG---SNFLEAGTIL------TTPIGYIESCFMTKN 43
Fly 115 AVPRQSIVGSRLRGIIQLNDGVFTNPEHSLEGLEDFSHLWLIYHFHRNNS-HPKAKADNFCFYNE 178
..|||..|.|..||.::::..||.||||||.|:|.|||:|:::.||:|.. ..|||...
Frog 44 GTPRQPSVCSLSRGRLRISKSVFNNPEHSLIGIEQFSHVWILFVFHKNGRLSCKAKVQP------ 102
Fly 179 HYDSLKGLSSWAYQTLDAHRKDKRDPCYSLEELEKSLTYDDLWNSAQLQLVREGKMHG 236
..|.|..:..:.|...||. |:..|.|||..|:.|
Frog 103 --PRLNGAKTGVFSTRSPHRP----------------------NAIGLTLVRLEKVEG 136
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG18853 | NP_724615.1 |
UPF0066 |
100..>163 |
CDD:294485 |
29/62 (47%) |
trmo | NP_001016423.2 |
UPF0066 |
44..163 |
CDD:396527 |
39/123 (32%) |
TrmO_C |
308..>371 |
CDD:408188 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1483097at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0005744 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48276 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X4138 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.920 |
|
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