DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18853 and Trmo

DIOPT Version :10

Sequence 1:NP_724615.1 Gene:CG18853 / 246511 FlyBaseID:FBgn0042173 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_038965382.1 Gene:Trmo / 298072 RGDID:1305420 Length:442 Species:Rattus norvegicus


Alignment Length:147 Identity:46/147 - (31%)
Similarity:72/147 - (48%) Gaps:19/147 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 HQQQTQDQQTGQ--GQSNYTNGGHCLGEDYAHFRPIGVIRTAFPEKRAVPRQSIVGSRLRGIIQL 132
            |:...:|.:|..  .|..|::..:.|.|      |||.:.:.|..|...|||..:.|:.|..:::
  Rat    15 HKSMDEDLKTTNPPKQKLYSSNWNLLTE------PIGYLESCFSAKIGTPRQPSICSQSRACLKI 73

  Fly   133 NDGVFTNPEHSLEGLEDFSHLWLIYHFHRN-NSHPKAKADNFCFYNEHYDSLKGLSSWAYQTLDA 196
            ...:|.||||||.|||.|||:|:::.||:| :.:.|||...        ..|.|..:..:.|...
  Rat    74 RKSIFNNPEHSLMGLEQFSHVWILFVFHKNGHLNYKAKVQP--------PRLNGAKTGVFSTRSP 130

  Fly   197 HRKDKRDPCYSLEELEK 213
            ||.:...  .:|.:|||
  Rat   131 HRPNAIG--LTLAKLEK 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18853NP_724615.1 UPF0066 98..>162 CDD:469902 26/63 (41%)
phr2 <170..322 CDD:129679 9/44 (20%)
TrmoXP_038965382.1 TrmO 56..175 CDD:460402 34/100 (34%)
TrmO_C 336..404 CDD:465738
Blue background indicates that the domain is not in the aligned region.

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