DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30187 and CG11842

DIOPT Version :10

Sequence 1:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:239 Identity:77/239 - (32%)
Similarity:102/239 - (42%) Gaps:42/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HNRTHFICGGTLIHKRFVLTAAHCIVDQ--DVQSVSLGAY------NKSDPADRKDVITAVVHSS 110
            :....:.||||||..|.|||||||....  .|....||..      :.:||.| .||.....|..
  Fly    96 NGEVEWFCGGTLISDRHVLTAAHCHYSPQGSVNIARLGDLEFDTNNDDADPED-FDVKDFTAHPE 159

  Fly   111 FDVRASYENDIGLLKLSSDVIFNALIRPICIVLNKSMANHMRNMRTFKAFGWGTLR-----GNKT 170
            |...|.| |||.:::||..|.||....|.|:..:..     |...:|.|.|||.|.     .||.
  Fly   160 FSYPAIY-NDISVVRLSRPVTFNDYKHPACLPFDDG-----RLGTSFIAIGWGQLEIVPRTENKK 218

  Fly   171 SDILQTIILNH--------LDREECYMEL-SVYPSEKQICAGV-PSGDTCGGDSGGPLTNDVFIQ 225
               ||.:.|.:        .||.:   || ..|.:..|:|.|. ...|||.||||||:.  ::..
  Fly   219 ---LQKVKLYNYGTRCRITADRND---ELPEGYNATTQLCIGSNEHKDTCNGDSGGPVL--IYHM 275

  Fly   226 GIGNREVQFGIISVGKTSCDG---QGVYTDLMSFADWIKMTIER 266
            .........||.|:| .:||.   ..:||.:..:.||||..:.:
  Fly   276 DYPCMYHVMGITSIG-VACDTPDLPAMYTRVHFYLDWIKQQLAK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 74/231 (32%)
Trypsin 316..>384 CDD:459667
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 77/234 (33%)
Blue background indicates that the domain is not in the aligned region.

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