DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30187 and CG5255

DIOPT Version :10

Sequence 1:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster


Alignment Length:204 Identity:60/204 - (29%)
Similarity:97/204 - (47%) Gaps:31/204 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KITGGHNAA-----FQNSVWMAAVHNRTHFICGGTLIHKRFVLTAAHCIVDQDVQS--VSLGAY- 91
            :|.||..||     :|.|  :..:.:..| .|||.:|.:|:::|||||...:...:  |..|.. 
  Fly    29 RIVGGEEAAAGLAPYQIS--LQGIGSGAH-SCGGAIIDERWIITAAHCTRGRQATAFRVLTGTQD 90

  Fly    92 -----NKSDPADRKDVITAVVHSSFDVRASYENDIGLLKLSSDVIFNALIRPICIVLNKSMANHM 151
                 :|....||     .|.||::..| .|.|||.||.|:..::|:...:|:.:. ::::....
  Fly    91 LHQNGSKYYYPDR-----IVEHSNYAPR-KYRNDIALLHLNESIVFDNATQPVELD-HEALVPGS 148

  Fly   152 RNMRTFKAFGWGTLR-GNKTSDILQTIILNHLDREECYM--ELSVYPSEKQICAGVPSG-DTCGG 212
            |.:.|    |||||. |......||::.:|::..|:|..  :.|.......:|.....| ..|.|
  Fly   149 RLLLT----GWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCTFNDKGRGACHG 209

  Fly   213 DSGGPLTND 221
            ||||||.::
  Fly   210 DSGGPLVHN 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 60/204 (29%)
Trypsin 316..>384 CDD:459667
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 60/204 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.