DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30187 and modSP

DIOPT Version :10

Sequence 1:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:283 Identity:72/283 - (25%)
Similarity:113/283 - (39%) Gaps:49/283 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DQICGINIALKI----TGGHNAAFQNSV--WMAAV---HNRT--HFICGGTLIHKRFVLTAAHCI 78
            :|.|| .:|..|    :||:  ...|:|  |...:   ||..  ||.|||:|:....|:|||||:
  Fly   355 EQDCG-QLATPIKQFSSGGY--TINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCV 416

  Fly    79 VDQD------------VQSVSLGAYNKSDPAD-RKDVITAVVHSSFDVRA-SYENDIGLLKLSSD 129
            .|:.            :.:.....|.::.|.: |:||....:...:..|. :|..|:.||.|...
  Fly   417 YDEGTRLPYSYDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYYQDLALLTLDEP 481

  Fly   130 VIFNALIRPICIVL-----NKSMANHMRNMRTFKAFGWGTLRGNKTSDILQTIILNHLDREECYM 189
            ...:.:|||||:..     .:|:.:.::.    |..||..  .||..  ||.:.........|..
  Fly   482 FELSHVIRPICVTFASFAEKESVTDDVQG----KFAGWNI--ENKHE--LQFVPAVSKSNSVCRR 538

  Fly   190 ELSVYPSEKQICAGVPSGDTCGGDSGGPLTNDVFIQGIGN----REVQFGIISVGKTS---CDGQ 247
            .|....::|...........|.|||||..|:::.......    |...||:||....:   ....
  Fly   539 NLRDIQADKFCIFTQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAHSL 603

  Fly   248 GVYTDLMSFADWIKMTIERLSIE 270
            .|.|::..|.|.|...:.| |:|
  Fly   604 TVMTNIQHFEDMILNAMNR-SVE 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 64/261 (25%)
Trypsin 316..>384 CDD:459667
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 63/254 (25%)
Blue background indicates that the domain is not in the aligned region.

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