DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30187 and CG3505

DIOPT Version :10

Sequence 1:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster


Alignment Length:262 Identity:70/262 - (26%)
Similarity:112/262 - (42%) Gaps:77/262 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 WMAAV------HNRTHFICGGTLIHKRFVLTAAHCIV-----DQDVQSVSLGAYNKSDPAD---R 99
            |:|.:      ..:.| .|||.||..|:|||||||:.     :..:.:|.||.::.|...|   .
  Fly   120 WLALIEYTRGNQEKIH-ACGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTSTNPDCQYH 183

  Fly   100 KDVITAVVHSSFDVRASYE---------------------NDIGLLKLSSDVIFNALIRPICIVL 143
            :|...|      |....|:                     |||.|::|:|....|..::|||:..
  Fly   184 EDSKVA------DCAPPYQDIAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQPICLPN 242

  Fly   144 NKSMANHMRNMRTFKAFGW---GTLRGNKTSDILQTIILNHLDREECYMELSVYPSEK------Q 199
            .:..|:.:.::.| :..||   .:.|..|....:.:|       |||..:   |.|::      :
  Fly   243 KQLRADELEDLVT-EVAGWQASSSQRMRKGYVTISSI-------EECQRK---YASQQLRIQASK 296

  Fly   200 ICAGVPSGDTCGGDSGGPL---TNDVFIQGIGNREVQFGIISVGKTSC---DGQGVYTDLMSFAD 258
            :| |:.:...|.|::||||   .||.::.|        |::|.|...|   |...|||.:.|:.|
  Fly   297 LC-GLTNSQECYGNAGGPLMLFKNDGYLLG--------GLVSFGPVPCPNPDWPDVYTRVASYID 352

  Fly   259 WI 260
            ||
  Fly   353 WI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 68/260 (26%)
Trypsin 316..>384 CDD:459667
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 70/262 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.