DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30187 and snk

DIOPT Version :10

Sequence 1:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:287 Identity:92/287 - (32%)
Similarity:133/287 - (46%) Gaps:65/287 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LKDVGASIFLDQICGINIALKITGG---------HNAAFQNSVWMAAVHNRTHFI---CGGTLIH 67
            |.|.|.: |..:.|..::.| |.||         |.||..   |.....::...|   |||.|:.
  Fly   167 LTDTGRT-FSGKQCVPSVPL-IVGGTPTRHGLFPHMAALG---WTQGSGSKDQDIKWGCGGALVS 226

  Fly    68 KRFVLTAAHCIV--DQDVQSVSLGAYNKSD-PADRKD--VITAVVHSSFDVRAS-YENDIGLLKL 126
            :.:|||||||..  .:....|.|||...:: .|.::|  ::..|:|..:  |:| |.:||.||||
  Fly   227 ELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKY--RSSAYYHDIALLKL 289

  Fly   127 SSDVIFNALIRPICIVLNKSMANHMRNMRTFKAFGWGTLR--GNKTSDILQTIILNHLDREECYM 189
            :..|.|:..:||.|:.....:     .:.|..|.|||...  |.| |:.|:.:.|:.:.:..|  
  Fly   290 TRRVKFSEQVRPACLWQLPEL-----QIPTVVAAGWGRTEFLGAK-SNALRQVDLDVVPQMTC-- 346

  Fly   190 ELSVYPSEK---------QICAG-VPSG-DTCGGDSGGPL------TNDV-FIQGIGNREVQFGI 236
             ..:|..|:         |.||| :|.| |||.||||||:      .|.| |:         .||
  Fly   347 -KQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFV---------VGI 401

  Fly   237 ISVGK--TSCDGQGVYTDLMSFADWIK 261
            .|.||  .:.:..||||.|.|:.|||:
  Fly   402 TSFGKFCAAPNAPGVYTRLYSYLDWIE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 84/264 (32%)
Trypsin 316..>384 CDD:459667
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 86/266 (32%)
Blue background indicates that the domain is not in the aligned region.

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