DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30187 and Jon25Biii

DIOPT Version :10

Sequence 1:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster


Alignment Length:284 Identity:78/284 - (27%)
Similarity:108/284 - (38%) Gaps:91/284 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FLKDVGASIFLDQICGINIALKITGGHNA-----------AFQNSVWMAAVHNRTHFICGGTLIH 67
            |:||:..:        ..|..:||.|:.|           .|....|           |||::|.
  Fly    23 FVKDLPKA--------TKIEGRITNGYAAPEGKAPYTVGLGFSGGWW-----------CGGSIIA 68

  Fly    68 KRFVLTAAHCIVDQDVQSVSLGAYNKSDPADRKDVITAVVHSSFDVRASYENDIG---LLKLSSD 129
            ..:||||.|||.|.....|..||                   ::...|.:.:.:|   .:|.|:.
  Fly    69 HDWVLTAEHCIGDAASVIVYFGA-------------------TWRTNAQFTHTVGNGNFIKHSNA 114

  Fly   130 VIFNALIR----PICIVLNK----SMANHMRNMRTF--KAFGW-GTLRGNKTSDILQTIILNHLD 183
            .|  ||||    ....::||    |..:...|...:  .|.|| ||..|:...|.||.:.|..:.
  Fly   115 DI--ALIRIPHVDFWHMVNKVELPSYNDRYNNYNEWWAVACGWGGTYDGSPLPDWLQCVDLQIVH 177

  Fly   184 REECYMELSVYPS--EKQICAGVPSGDT-CGGDSGGPL-TNDVFIQGIGNREVQFGIIS-VGKTS 243
            .|||..   .|.|  :..||.....|.: ||||||||| |:|      |::.|  |:.: |....
  Fly   178 NEECGW---TYGSVGDNVICTRTVDGKSICGGDSGGPLVTHD------GSKLV--GVSNFVSSNG 231

  Fly   244 CDG------QGVYTDLMSFADWIK 261
            |..      |.|...|    |||:
  Fly   232 CQSGAPAGFQRVTYHL----DWIR 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 72/260 (28%)
Trypsin 316..>384 CDD:459667
Jon25BiiiNP_608881.1 Tryp_SPc 37..253 CDD:238113 74/262 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.