DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30187 and CG30088

DIOPT Version :10

Sequence 1:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:266 Identity:96/266 - (36%)
Similarity:145/266 - (54%) Gaps:23/266 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LKDVGASIFLDQICGI----NIALKITGGHNAAFQNSVWMAAVHNRTHFICGGTLIHKRFVLTAA 75
            |::..|:.||...||:    |:|.:|..|..|..:::.:||.::..:...||||:|..|::||||
  Fly    20 LQEQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAA 84

  Fly    76 HCIVDQDVQSVSLGAY-----------NKSDPADRKDVITAVVHSSFDVRASYENDIGLLKLSSD 129
            ||:  :....|.||.:           :.|.||:..|::.|..:..||  ....|||.|||||.:
  Fly    85 HCM--RPYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFD--RFLANDIALLKLSRN 145

  Fly   130 VIFNALIRPICIVLNKSMANHMRNMRTFKAFGWGTLRGNKTSDILQTIILNHLDREECYMELSVY 194
            :.||..|:|||::||.:.|   .|:..|:|||||....|.::::|||.:|...|...|...||:.
  Fly   146 IRFNVHIQPICLILNPAAA---PNVHEFQAFGWGQTETNHSANVLQTTVLTRYDNRHCRSVLSMP 207

  Fly   195 PSEKQICAGVPSGDTCGGDSGGPLTNDVFIQGIGNREVQFGIISVGKTSCDGQGVYTDLMSFADW 259
            .:..|:|.|....|||.|||||||...|...|:. |.:|.||:|.|...|...||||.:.::..|
  Fly   208 ITINQLCVGFQGSDTCSGDSGGPLVTKVNYDGVW-RYLQLGIVSFGDDKCQSPGVYTYVPNYIRW 271

  Fly   260 IKMTIE 265
            |:..::
  Fly   272 IRYVMQ 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 86/235 (37%)
Trypsin 316..>384 CDD:459667
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 87/235 (37%)
Blue background indicates that the domain is not in the aligned region.

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