DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP3 and Vars1

DIOPT Version :9

Sequence 1:NP_660194.1 Gene:AIMP3 / 246507 FlyBaseID:FBgn0050185 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_445744.1 Gene:Vars1 / 25009 RGDID:3950 Length:1264 Species:Rattus norvegicus


Alignment Length:114 Identity:28/114 - (24%)
Similarity:48/114 - (42%) Gaps:37/114 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SRASREVEAQVYQWIEFSVLYVAP-----------------------GSKDKYVSKQLLADFNKL 102
            |||:    ..|.||:.::...:.|                       |:..|.::.  |.::.:|
  Rat    90 SRAA----VLVQQWVSYADTELTPAACGATLPALGLRGPGQDPQAALGALGKALNP--LEEWLRL 148

  Fly   103 FASKSYLVGHFITLADLAVYYAI---YDLVKSLSPVDKEVYLNLSRWFD 148
               .:||.|...||||||...|:   :..|  |.|..:.::.|::|||:
  Rat   149 ---HTYLAGDAPTLADLAAVTALLLPFRYV--LDPSARRIWGNVTRWFN 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP3NP_660194.1 GST_C_AIMP3 65..166 CDD:198338 25/110 (23%)
Vars1NP_445744.1 GstA <56..203 CDD:223698 28/114 (25%)
GST_C_family 92..213 CDD:295467 26/112 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..296
PTZ00419 282..1264 CDD:240411
ValRS_core 335..938 CDD:185677
'HIGH' region 344..354
tRNA-synt_1_2 513..640 CDD:290334
'KMSKS' region 862..866
Anticodon_Ia_Val 938..1075 CDD:153416
Val_tRNA-synt_C 1196..1258 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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