DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30184 and TRA1

DIOPT Version :9

Sequence 1:NP_726341.1 Gene:CG30184 / 246506 FlyBaseID:FBgn0050184 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_011967.1 Gene:TRA1 / 856499 SGDID:S000001141 Length:3744 Species:Saccharomyces cerevisiae


Alignment Length:107 Identity:27/107 - (25%)
Similarity:47/107 - (43%) Gaps:15/107 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VALYAGAIYLMHCTFALDLMFSHSRSRAN--------QKMHPQRSKRPLQLYFISRGAEAYLSRF 173
            :.:|.|  ||:..:.||.:....::...|        .|.:||.:.|..:|..|.  .::|::||
Yeast   415 IKIYTG--YLLDESLALTVQIMSAKLLLNLVERILKLGKENPQEAPRAKKLLMII--IDSYMNRF 475

  Fly   174 -WFFRRIAARMLTSAQPSEHSGRK-RQVSSSESDSDAKEREE 213
             ...|:....|....:...|...| .::.:|..|:| ||.||
Yeast   476 KTLNRQYDTIMKYYGRYETHKKEKAEKLKNSIQDND-KESEE 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30184NP_726341.1 None
TRA1NP_011967.1 TEL1 1232..3744 CDD:227365
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.