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Protein Alignment CG30184 and SMG1
DIOPT Version :9
Sequence 1: | NP_726341.1 |
Gene: | CG30184 / 246506 |
FlyBaseID: | FBgn0050184 |
Length: | 223 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005255239.1 |
Gene: | SMG1 / 23049 |
HGNCID: | 30045 |
Length: | 3689 |
Species: | Homo sapiens |
Alignment Length: | 80 |
Identity: | 20/80 - (25%) |
Similarity: | 31/80 - (38%) |
Gaps: | 15/80 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 TCFMEE-GVPHIFLLCGTYGGSVIICFISLIGAFYAERPTMKHEALFGGILGGLHMVTVYANMY- 92
|.|::. |..|:...|....|.| ||...:| .::..|.|..||.....|..|
Human 2629 TAFLQNAGQAHLISQCEQLEGEV--------GALLQQR-----RSVLRGCLEQLHHYATVALQYP 2680
Fly 93 VATLEEFRTERWPSF 107
.|..::.|.|:|.::
Human 2681 KAIFQKHRIEQWKTW 2695
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG30184 | NP_726341.1 |
None |
SMG1 | XP_005255239.1 |
SMG1 |
631..1242 |
CDD:292413 |
|
PIKKc_SMG1 |
2121..2454 |
CDD:270714 |
|
FATC |
3659..3688 |
CDD:280430 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5032 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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