DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk3 and Asic1

DIOPT Version :9

Sequence 1:NP_726336.1 Gene:ppk3 / 246504 FlyBaseID:FBgn0050181 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_006257440.1 Gene:Asic1 / 79123 RGDID:71062 Length:559 Species:Rattus norvegicus


Alignment Length:504 Identity:103/504 - (20%)
Similarity:155/504 - (30%) Gaps:160/504 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RDVVAQAGAETGLLALSLCVNRSIHLL-------ERLFWLAVVVSSVIAALVLSRLQLERYFSSP 97
            ||:||        .|.|..::.:.|:.       .:..|....|.::.|.|.....::..|.|.|
  Rat    61 RDLVA--------FANSCTLHGASHVFVEGGPGPRQALWAVAFVIALGAFLCQVGDRVAYYLSYP 117

  Fly    98 TVISVDRDYRGWNGSLPAVTLCYYDHIDSFKANEYIQEMWNVSIIDEDYFYFMDFLY-------- 154
            .|..:| :........||||.|                  |.:.:......:.|.||        
  Rat   118 HVTLLD-EVATTELVFPAVTFC------------------NTNAVRLSQLSYPDLLYLAPMLGLD 163

  Fly   155 -----AVVNATAGNYAELAKFAEDERF--DQIDLYEMIQRVDRPFEQVI--SSFDAG------FQ 204
                 .|..|..|          .|.|  :..:|:....|.....|.::  .|:..|      |.
  Rat   164 ESDDPGVPLAPPG----------PEAFSGEPFNLHRFYNRSCHRLEDMLLYCSYCGGPCGPHNFS 218

  Fly   205 VHVQRVMTERGACYAINS------PMSTVLSGQPVAYELMPQPLSCQYGKQQCYIRMDLYESTGV 263
            |    |.|..|.||..||      .:.|:..|.....|:|..            |:.|.|     
  Rat   219 V----VFTRYGKCYTFNSGQDGRPRLKTMKGGTGNGLEIMLD------------IQQDEY----- 262

  Fly   264 LDVHSPFEVSATEANI-VALHKSDE----------ITASFKVLETVASKNLRQLSVAQRKCVFNN 317
            |.|....:.::.||.| |.:|..||          :...|:...:...:.|..|......|....
  Rat   263 LPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQEQRLIYLPSPWGTCNAVT 327

  Fly   318 EETSNLKIYSKSLCLARCRAVMALEMCNCVPFFYPYVDGPSCNPAGF-EC---LLDFKWPIWAL- 377
            .::.....||.:.|...|.....:|.|||.....| .|.|.|.|..: ||   .|||      | 
  Rat   328 MDSDFFDSYSITACRIDCETRYLVENCNCRMVHMP-GDAPYCTPEQYKECADPALDF------LV 385

  Fly   378 ----HICKCPSTC-----------------TEIEYTMQTVKKSSWGVKNN-------EEVASSET 414
                ..|.|...|                 ...:|..:...||...:..|       .||.:.||
  Rat   386 EKDQEYCVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKSEQYIGENILVLDIFFEVLNYET 450

  Fly   415 ATSSFRWDLIPPKVRMRRDVVYSFEDLVVSFGGVLALFVGVSVMGLVEM 463
                           :.:...|....|:...||.:.||:|.|::.::|:
  Rat   451 ---------------IEQKKAYEIAGLLGDIGGQMGLFIGASILTVLEL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk3NP_726336.1 ASC 59..464 CDD:279230 97/485 (20%)
Asic1XP_006257440.1 ASC 63..541 CDD:295594 101/502 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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