DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk3 and asic4a

DIOPT Version :9

Sequence 1:NP_726336.1 Gene:ppk3 / 246504 FlyBaseID:FBgn0050181 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_999952.1 Gene:asic4a / 407668 ZFINID:ZDB-GENE-040513-5 Length:539 Species:Danio rerio


Alignment Length:580 Identity:121/580 - (20%)
Similarity:190/580 - (32%) Gaps:184/580 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LAGCGRLF--GRLRDVVAQAGAETGLLALSLCVNRSIHLLERLFWLAVVVSSVIAALVLSRLQLE 91
            |.|...:|  |||       |....|.||:..|:.::.|.:            .|...:|     
Zfish    50 LHGINHIFVSGRL-------GVRQTLWALAFLVSLALFLYQ------------AAKCAIS----- 90

  Fly    92 RYFSSPTVISVDRDYRGWNGSLPAVTLCYYDHIDSFKANEYIQEMWNVSIIDEDYFYFMDFLYAV 156
             |...|.|.:::.:... ....||||:|   :|:.|:.:         ::.|.|       :|.:
Zfish    91 -YLEHPHVTALNEEATP-EMVFPAVTIC---NINRFRFS---------ALTDAD-------IYHL 134

  Fly   157 VNATA-------GNYAELAKFAEDERFDQIDLYEMIQRVDRPFEQVISSFD--------AGFQVH 206
            .|.|.       |:.      ..|..:...|:.::..|.....|:::.|.:        ..|.| 
Zfish   135 ANLTGLPPKNKDGHK------PTDLEYPAPDMQDIFNRTGHQLEEMLKSCNFSGQNCSAEDFTV- 192

  Fly   207 VQRVMTERGACYAIN----SPMSTVLSGQPVAYELMPQPLSCQYGKQQCYIRMDLYESTGVLDVH 267
               |.|..|.||..|    :...|...|.....|:|..            |:.|.|     |.:.
Zfish   193 ---VYTRYGKCYTFNGNKTTSRKTKQGGMGNGLEIMLD------------IQQDDY-----LPIW 237

  Fly   268 SPFEVSATEANI-VALHKSDE----------ITASFKVLETVASKNLRQLSVAQRKCVFNNEE-T 320
            .....::.||.| |.:|..||          ::..|:...:...:.|..|......|...:|: .
Zfish   238 KETNETSLEAGIRVQIHSQDEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRSTSEQMI 302

  Fly   321 SNLKIYSKSLCLARCRAVMALEMCNCVPFFYPYVDGPSCNPAGFECLLDFKWPIWALHI------ 379
            .....||.|.|..||..:..|..|.|.....| .|...|.|:..:|:..      ||.:      
Zfish   303 PGYDTYSISACRLRCETLEVLRECKCRMVHMP-GDANICTPSDIKCVDK------ALALLQKSSG 360

  Fly   380 --CKCPSTCTEIEY--TMQTVKKSSWGV---------KNNEEVASSETATSSFRWDLIPPKVRMR 431
              |.|.:.|....|  .:..||..|.|.         |:.:.:..:......|...|....:..:
Zfish   361 DTCFCETPCNLTRYGKELSMVKIPSKGSARYLSRKYDKSEDYIRDNFLVLDIFFEALNYETIEQK 425

  Fly   432 RDVVYSFEDLVVSFGGVLALFVGVSVMGLVEMVHVLVNNLLLD-VFTLLRLMLGRLRRCWRRDD- 494
            :  .|....|:...||.:.||:|.||:.::|         :|| |:.:::..|.||.|. :||| 
Zfish   426 K--AYDVAGLLGDIGGQMGLFIGASVLTILE---------ILDYVYEVIKHRLERLLRP-QRDDK 478

  Fly   495 -------------------------------HMREA-------NHHHHANAHAHARLHDF 516
                                           |...|       |||||...| |....||
Zfish   479 KQTQQQQQASTVATVNLEEMKAKDSSEMSRSHSEGAYANTILPNHHHHHRTH-HRVSEDF 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk3NP_726336.1 ASC 59..464 CDD:279230 90/454 (20%)
asic4aNP_999952.1 ASC 44..472 CDD:295594 106/511 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 474..494 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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