DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk3 and asic-2

DIOPT Version :9

Sequence 1:NP_726336.1 Gene:ppk3 / 246504 FlyBaseID:FBgn0050181 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:489 Identity:100/489 - (20%)
Similarity:171/489 - (34%) Gaps:130/489 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LERLFWLAVVVSSVIAALVLSRLQLE------RYFSSPTVISVDRDYRGWNGSLPAVTLC----- 119
            :.|:||:|:.:      .||.....|      ::||.|..::.:..:.  ....|.||:|     
 Worm    32 ISRIFWIAIFL------FVLGMFAYELYILIAKFFSYPATVNTEILFE--KQIFPVVTVCNMNPY 88

  Fly   120 YYDHIDSFKA----------------NEYIQEMWNVSIIDEDYFYFMDFLYAVVNATAGN-YAEL 167
            .|..:.|..|                ..:..:.|.: ..|.|..|.:|...|.......| .::.
 Worm    89 KYSVVKSNSAFSSVNTLMTTYSDATVGTFSTDKWGL-YADNDETYDLDSRAADALVLEANLISDT 152

  Fly   168 AKFAEDERFDQIDLY---EMIQRVDRPFEQVISSFDAGFQVHVQRVMTERGACYAINSPMSTVLS 229
            ||...        ||   ::||  |..|..:..| ::.|...:..|.   ||||:.|...|...|
 Worm   153 AKVPA--------LYTYADLIQ--DCSFAGIPCS-ESDFTKFIDPVY---GACYSFNEDASLNYS 203

  Fly   230 GQPVAYELMPQPLSCQYGKQQCYIRMDLYESTGVLD-------------VHSPFEVSATEANIVA 281
               |:.|      ..|:| .:..:.:...::.|..|             |:|.......::|.:.
 Worm   204 ---VSRE------GIQFG-LKLMLTVTQTKTNGNTDSLPTTKLAGARIGVNSRGSSPGLDSNGID 258

  Fly   282 LHKSDEITASFKVLETVASKNLRQLSVAQRKCVFNNEETSNLK---IYSKSLCLARCRAVMALEM 343
            .....|...|..:.:.|.:|.      ....||....::|:..   ||:...|...|:....:..
 Worm   259 AGVGYESAVSVSLTQNVRAKK------PYGTCVDREPDSSDYYKDFIYTLETCFNGCKQRDTIAK 317

  Fly   344 CNCV-PFFYPYVDGPSCNP--AGFECLLDFKW-------PIWALHICKCPSTCTEIEYTMQTVKK 398
            |.|. |.........:|.|  |..:||...|.       .|..|..|.|...|.|..|| .||..
 Worm   318 CQCANPRLALGSTDTACQPIKADLDCLQTLKGNQTSSTPNIDLLVECNCNPPCDESTYT-PTVSL 381

  Fly   399 SSWGVKNNEEVASSETA--------TSSF-------RW----DLIPPKVRMRRDVV--------- 435
            :.: ...:..||:|.||        .|.|       :|    .:|   :::..:.:         
 Worm   382 AQF-PSTSYYVATSSTAGVGSCSSTNSKFSSKSDCQKWYNNNGMI---IQVFLETLSYELYTETA 442

  Fly   436 -YSFEDLVVSFGGVLALFVGVSVMGLVEMVHVLV 468
             |:..:::...||...|::|:||:.:|||..:::
 Worm   443 GYTVSNVINDLGGQAGLWLGLSVISVVEMTGLML 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk3NP_726336.1 ASC 59..464 CDD:279230 99/483 (20%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 100/485 (21%)
ASC 13..471 CDD:279230 98/482 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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