DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk3 and acd-1

DIOPT Version :9

Sequence 1:NP_726336.1 Gene:ppk3 / 246504 FlyBaseID:FBgn0050181 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_491295.2 Gene:acd-1 / 182852 WormBaseID:WBGene00016064 Length:635 Species:Caenorhabditis elegans


Alignment Length:547 Identity:118/547 - (21%)
Similarity:188/547 - (34%) Gaps:157/547 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 CVNRSIHLLER---------LFWLAVVVSSVIAALVLSRLQLERYFSSPTVISVDRDYRGWNGSL 113
            |...::|..:|         ||||.:|..|:...:....:....|.|.|||..|...........
 Worm    84 CETTTMHGPKRIFQGKRWATLFWLIMVSCSLGLLITQVFILASEYLSKPTVSDVSFLINEDGMDF 148

  Fly   114 PAVTLCYYDHIDSFKANEYIQEMWNVS--IIDEDYFYFMDFLYAVVNATAGNYAELAKFAEDERF 176
            |.:|:|..:.|.....|| |.:...||  :|:    |.|.:...:.....|  |:.....|..  
 Worm   149 PLITICNLNPIRKTYVNE-INKTGEVSPPMIN----YMMKWFTEIPTLIGG--ADRPTLHEGN-- 204

  Fly   177 DQIDLY---EMIQRVDRPFEQVISSFD-------AGFQVHV-------QRVMTERGACYAINSPM 224
            :::.||   .:...||..|  :.|.|.       ..||..:       ..|:|..|.|:.::...
 Worm   205 EELKLYMKNHLNFTVDSFF--MNSGFSCPDIFKLCSFQGEIFDCCTLSTEVLTPLGKCFTLDLSS 267

  Fly   225 STVLS----GQPVAYELMPQPLSCQYGKQQCYIRMDLYESTGVLD--------------VHSPFE 271
            ||..|    .:|.....:...|.....:|        ::.:..:|              ||.|  
 Worm   268 STKASMHKQTEPGIQAGLAITLDAHLEEQ--------FDGSNGMDALFTNSFVNGFRYFVHPP-- 322

  Fly   272 VSATEANIVALHKSDEITASFKVLETVASKNLRQLSVAQRK---CVFNNEE--TSNLKIYSKSLC 331
                  |.:....|||.|.|...:...|..:.|.:.:...:   |..|..:  .|||. ||...|
 Worm   323 ------NTIPHLSSDEFTVSPNTVAFSAISSDRYVLLPTHQWGNCTENFPDGIQSNLS-YSSGNC 380

  Fly   332 LARCRAVMALEMCNCVPFFYPYVDG-PSCNPAGFE---CL-------------LDFKWPIWALHI 379
            |:.|:|...:|.|.|.|..|...:. ..|.|  :|   ||             ::|:.|     .
 Worm   381 LSLCKAKFYMENCGCTPALYNIENNLKECTP--YETTTCLDNILAKPNKETGKIEFQTP-----N 438

  Fly   380 CK-CPSTCTEIEYTMQTVKKSSWGVKNNEEVASSETATSSFRW-DLIPPK---VRMR-------- 431
            || |...|..:.|...    :|:|         |:.:..:|.: ..|.|:   ..||        
 Worm   439 CKACAQQCNSLVYRAY----NSYG---------SQFSAGAFHYLKSINPEWTDGHMRANFQMINI 490

  Fly   432 --RDVVY---------SFEDLVVSFGGVLALFVGVSVMGLVEMVHVLVNNLLLDVFTLLRLMLGR 485
              ||:.|         |...|:...||.:.:|:|:||:.:.|:.          :|......||.
 Worm   491 FYRDMSYTEYNQVQDASVTQLLSDIGGNMGMFLGMSVITITEIC----------LFFSKMFWLGF 545

  Fly   486 LRRCWRRDDHMREANHHHHANAHAHAR 512
            .:   :|.|:|    :....|...|.|
 Worm   546 SK---KRRDYM----YSKRVNEKTHER 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk3NP_726336.1 ASC 59..464 CDD:279230 108/496 (22%)
acd-1NP_491295.2 ASC 83..536 CDD:279230 109/509 (21%)
deg-1 83..536 CDD:273309 109/509 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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