DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk3 and del-8

DIOPT Version :9

Sequence 1:NP_726336.1 Gene:ppk3 / 246504 FlyBaseID:FBgn0050181 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_509617.2 Gene:del-8 / 182514 WormBaseID:WBGene00007518 Length:553 Species:Caenorhabditis elegans


Alignment Length:490 Identity:85/490 - (17%)
Similarity:152/490 - (31%) Gaps:185/490 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RLFWLAVVVSSVIAALVLSRLQLERYFSSPTVIS-----VDRDYRGWNGSLPAVTLC-------- 119
            |:||..|::..:......:.|.:..|...||..|     ||      :...||:|:|        
 Worm    53 RIFWWIVIIICISLGAFTTVLIIIEYIQGPTATSTTIRLVD------SLEFPAITICPKVPDSFN 111

  Fly   120 -------------------YYDHIDSFKANEYIQEMWNVSIIDEDYFYFMDFLYAVVNATAGNYA 165
                               ..|.::.|.|...::.|.:|:..:..|...::..|.:.:       
 Worm   112 ITGLRGDIKESLPDISDKTADDLLEFFVAGSGLENMNDVTYFNRTYLSHLNNYYKIWS------- 169

  Fly   166 ELAKFAEDERFDQIDLYEMIQR------VDRPFEQVISS--FDAGFQVHVQRVMTERGACYAINS 222
                    |.:.....:|:||:      .|..:|..::.  .|....:.|:||:..||.||    
 Worm   170 --------EGYSVDGFFEIIQQKYGYKCEDLFYECQLAGKILDCCNDLMVRRVVMRRGICY---- 222

  Fly   223 PMSTVLSGQPVAYELMPQPLSCQYGKQQCYIRMDLYESTG------VLDVHSPFEVSATEAN--- 278
                                         ..|.::.:|..      |..:.:|...::.:.|   
 Worm   223 -----------------------------QTRKNVNQSEADDIGRIVFSLKAPTSYTSVKTNYTQ 258

  Fly   279 ---IVALHKSDEITASFKVLETVASK------NLRQLSVAQRKCVFNNEETSNLKIYSKSL-CLA 333
               ||.:..:.::...|.......::      ..|.:.:.|.|.|..|.      |:.:.. ||.
 Worm   259 TQLIVYITDNHDVVTEFPRFYLYPNEWNRMRFTARLIELIQNKGVCTNH------IFGRDAECLV 317

  Fly   334 RCRAVMALEMCNCVPFFYPYVDGPSCNPAGFECLLDFKWPIWAL----HICKCPSTCTE-----I 389
            |             .::...:..|      |.|.|.:...|..|    .:|| |....:     |
 Worm   318 R-------------KWYLSNIIIP------FNCTLPYLKSITKLPPTTGVCK-PDVIADNYLDKI 362

  Fly   390 EYTMQTVKKSSWGVKNNEEVASSETATSSFRWD---------LIPPKVRMRRDVVYSFEDLVVSF 445
            :|.        |   |:.|| :.|......|||         .:.|......::..||.||...:
 Worm   363 QYV--------W---NSAEV-NEECTPGCNRWDYQTSVQQSQTLSPFEDYTFNLEASFNDLQYEY 415

  Fly   446 ----------------GGVLALFVGVSVMGLVEMV 464
                            ||....|:|:|::.|::||
 Worm   416 VKEIYTTSIPGFMSQIGGQFGFFLGLSIITLIQMV 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk3NP_726336.1 ASC 59..464 CDD:279230 83/488 (17%)
del-8NP_509617.2 ASC 38..452 CDD:279230 85/490 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.