DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk3 and scnn1g

DIOPT Version :9

Sequence 1:NP_726336.1 Gene:ppk3 / 246504 FlyBaseID:FBgn0050181 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_031749443.1 Gene:scnn1g / 100487822 XenbaseID:XB-GENE-980897 Length:672 Species:Xenopus tropicalis


Alignment Length:642 Identity:131/642 - (20%)
Similarity:205/642 - (31%) Gaps:239/642 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RDVVAQAGAE-----------TGLLALSL-------CVNRSIHLLERLF--------WLAVVVSS 78
            |.|::::|.:           ||..|.:|       |:|.:.|...|:.        |:.:|::.
 Frog     8 RSVMSKSGKKLTQKLKKNLPVTGPQAPTLYELMQWYCLNTNTHGCRRIVVSKGRLRRWIWIVLTL 72

  Fly    79 VIAALVL--SRLQLERYFSSPTVISVDRDYRGWNGSLPAVTLCYYDHIDSFKANEYIQEMWNVSI 141
            ...||:.  ..|.|..|:|....|:|...    ....||||:|        ..|.|         
 Frog    73 CAVALIFWQCALLLMSYYSVSASITVTFQ----KLVFPAVTIC--------NLNPY--------- 116

  Fly   142 IDEDYFYFMDFLYAVVNATAGNYAELAKFAE-----------DER-----FDQIDLY--EMIQR- 187
               .|....|.|.|:...|:.....:..|.|           ||.     ..||.||  |.:|. 
 Frog   117 ---SYSKIKDRLSALERETSQTLKNIYGFTEPLVRSKRDVEVDENSTDIFIKQIPLYRLESVQGN 178

  Fly   188 -------------------VDRPFEQV---------------------ISSFDAG-------FQV 205
                               :.|..|.|                     |.:|.:|       :::
 Frog   179 QLVVSDLKTKKRTRMSAKVIHRDAESVQDPGNMVGFKLCDPNNSSDCTIFTFSSGVNAIQEWYRL 243

  Fly   206 HVQRVMTE---------------------------------------RGACYAINSPMSTVLSGQ 231
            |...|:.:                                       .|.||..||.....|   
 Frog   244 HYTNVLAKISMEDKIAMGYKADELIVTCFFDGLSCDARNFTLFHHPLYGNCYTFNSAERGNL--- 305

  Fly   232 PVAYELMPQPLSCQYG-KQQCYIRMDLYESTGVLDVHSPFEVSATEANIVALHKSDE---ITASF 292
                 |:......:|| |...||..|.|         :|:..:|..|.|: :|..||   |....
 Frog   306 -----LVSSMGGAEYGLKVVLYIDEDEY---------NPYLSTAAGAKIL-VHDQDEYPFIEDLG 355

  Fly   293 KVLETVASKNL-------RQLSVAQRKCVFNNEETSNLKIYSK----SLCLARCRAVMALEMCNC 346
            ..|||....::       .:||.....|..:..:.|...:|||    .:||..|.....:..|.|
 Frog   356 TELETATETSIGMQLTESTKLSDPYSDCTMDGSDVSVENLYSKKYTLQICLNSCFQREMVRTCGC 420

  Fly   347 VPFFYPYVDGPS-CNPAGFECLLDFKWPIWALHICK-----------CPSTCTEI----EYTMQ- 394
            ..:..|..:|.. ||   :|     ::|.|.....|           |.|.|.|.    |:|:. 
 Frog   421 AHYDQPLPNGAKYCN---YE-----EYPSWIYCYFKLYKQFVQEELGCQSACRESCSFKEWTLTR 477

  Fly   395 -------------TVKKSSW--GVKNNEEVASSETAT-SSFRWDLIPPKVRMRRDVVYSFEDLVV 443
                         .::..||  |.|.|:.:..::.|. :.|..||....:  .....|:...|:.
 Frog   478 SLAKWPSLNSEQWMLRVLSWELGEKLNKNLTKNDLANLNIFYQDLNSRSI--SESPTYNIVTLLS 540

  Fly   444 SFGGVLALFVGVSVMGLVEMVHVLVNNLLLDVF-TLLRLMLGRLRRCWR-RDDHMRE 498
            :|||.|.|::..|::.::|:|.|    ..:|.| .:||....:|...|: |.|:..|
 Frog   541 NFGGQLGLWMSCSMICVLEIVEV----FFIDSFWVVLRQQWRKLCNWWKHRKDNQEE 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk3NP_726336.1 ASC 59..464 CDD:279230 112/567 (20%)
scnn1gXP_031749443.1 ENaC 35..651 CDD:273304 125/615 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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