DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and PDLIM7

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_005442.2 Gene:PDLIM7 / 9260 HGNCID:22958 Length:457 Species:Homo sapiens


Alignment Length:169 Identity:51/169 - (30%)
Similarity:88/169 - (52%) Gaps:2/169 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ICCRCNEKIWPRAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARCSACR 69
            :|.:|::.|..|.:.:||..|||..|.|.:||.|::...||.....:.|..||..::|..|:.|:
Human   281 VCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYAPSCAKCK 345

  Fly    70 TPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKPIDR- 133
            ..|....:.|.:..||..||.|.:|...:.:.:|:...|..:|:..:.::|.::|.||:..||. 
Human   346 KKITGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGVPYCERDYEKMFGTKCHGCDFKIDAG 410

  Fly   134 -RAVVALSTKWHAKCFKCHHCRKRISAREFWIENGQPIC 171
             |.:.||...||..||.|..|:..:..:.|:.:..:|:|
Human   411 DRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDRPLC 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 19/54 (35%)
LIM 65..116 CDD:259829 13/50 (26%)
LIM 124..171 CDD:413332 16/48 (33%)
PDLIM7NP_005442.2 PDZ_PDLIM-like 5..83 CDD:467235
PHA03247 <81..254 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..142
DUF4749 <120..189 CDD:464948
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..226
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..258
LIM1_Enigma 282..333 CDD:188836 17/50 (34%)
LIM2_Enigma 341..392 CDD:188840 13/50 (26%)
LIM3_Enigma 400..454 CDD:188842 17/50 (34%)
Blue background indicates that the domain is not in the aligned region.

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