DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and WLIM2b

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001190099.1 Gene:WLIM2b / 824743 AraportID:AT3G55770 Length:233 Species:Arabidopsis thaliana


Alignment Length:202 Identity:43/202 - (21%)
Similarity:58/202 - (28%) Gaps:106/202 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RCSACRTPILERGVAAAER------KWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELF-- 120
            :|.||     |:.|.|.|.      .:|:.||:|..|...|..:|:..:.|.|:||.||.:||  
plant     9 KCKAC-----EKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKE 68

  Fly   121 ------------------------------------SSRCAGCEK---PIDR------------- 133
                                                ..:||.|.|   ||::             
plant    69 SGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKIHNPLSYRELARK 133

  Fly   134 -------------------RAVVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAACQTVVP 179
                               ..|...|..:|..||||.|             .|.||         
plant   134 PNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSH-------------GGCPI--------- 176

  Fly   180 SPRNLSA 186
            ||.|.:|
plant   177 SPSNYAA 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332
LIM 65..116 CDD:259829 18/56 (32%)
LIM 124..171 CDD:413332 16/81 (20%)
WLIM2bNP_001190099.1 LIM1_SF3 6..68 CDD:188824 22/63 (35%)
LIM 108..202 CDD:413332 21/98 (21%)
Blue background indicates that the domain is not in the aligned region.

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