DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and ARHGAP28

DIOPT Version :9

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001353159.1 Gene:ARHGAP28 / 79822 HGNCID:25509 Length:729 Species:Homo sapiens


Alignment Length:87 Identity:21/87 - (24%)
Similarity:30/87 - (34%) Gaps:27/87 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KLFFAVDDDVVCSECYLDKHAARCSACRTPI------LERGVAAAERKWHEKCFRCVSCSKSLVS 100
            |.|..|::..:.||...     |.|.|...:      |:....|.:.||.:.|.|          
Human   404 KFFEKVEESGLESEGIF-----RLSGCTAKVKQYREELDAKFNADKFKWDKMCHR---------- 453

  Fly   101 ASFFEVNGYLFCKAHFRELFSS 122
                  ...:..||.||||.:|
Human   454 ------EAAVMLKAFFRELPTS 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:295319 5/18 (28%)
LIM 65..116 CDD:259829 10/56 (18%)
LIM 124..171 CDD:295319
ARHGAP28NP_001353159.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..105
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..236
RhoGAP_ARHGAP18 377..588 CDD:239856 21/87 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 612..631
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1093
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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