DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and PDLIM2

DIOPT Version :9

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_067643.3 Gene:PDLIM2 / 64236 HGNCID:13992 Length:602 Species:Homo sapiens


Alignment Length:59 Identity:18/59 - (30%)
Similarity:28/59 - (47%) Gaps:1/59 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CSACRTPILERGVAAAERKW-HEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSS 122
            |..|.|.|..:.|...|.:: |..|:.|..|..:|.....|.|...|:|:.|.|:.:|:
Human   536 CEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSA 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:295319
LIM 65..116 CDD:259829 15/51 (29%)
LIM 124..171 CDD:295319
PDLIM2NP_067643.3 PDZ_signaling 259..330 CDD:238492
DUF4749 <462..505 CDD:292558
LIM_Mystique 536..588 CDD:188833 15/51 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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