DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and PXN

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_047285192.1 Gene:PXN / 5829 HGNCID:9718 Length:1135 Species:Homo sapiens


Alignment Length:169 Identity:62/169 - (36%)
Similarity:90/169 - (53%) Gaps:0/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CCRCNEKIWPRAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARCSACRT 70
            |..||..|..:.|.:|.:|:||.||.|.:||....|:.|...|....|.:.|.|..|.:|..|..
Human   961 CYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCAR 1025

  Fly    71 PILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKPIDRRA 135
            .|||..::|....||.:||.|..|....|:.||||.:|..:|:.|:.|...|.|:||:|||..|.
Human  1026 AILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRC 1090

  Fly   136 VVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAAC 174
            :.|::.|:|.:.|.|..|.|:::...|..:|.:|.|..|
Human  1091 ITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNC 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 20/54 (37%)
LIM 65..116 CDD:259829 19/50 (38%)
LIM 124..171 CDD:413332 17/46 (37%)
PXNXP_047285192.1 Paxillin 60..259 CDD:460962
LIM1_Paxillin_like 902..954 CDD:259830
LIM2_Paxillin 961..1012 CDD:188791 18/50 (36%)
LIM3_Paxillin_like 1020..1072 CDD:188724 20/51 (39%)
LIM4_Paxillin 1079..1130 CDD:188795 19/51 (37%)
Blue background indicates that the domain is not in the aligned region.

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