powered by:
Protein Alignment CG30178 and pdlim3b
DIOPT Version :10
| Sequence 1: | NP_726395.1 |
Gene: | CG30178 / 246501 |
FlyBaseID: | FBgn0050178 |
Length: | 187 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_005157291.2 |
Gene: | pdlim3b / 561865 |
ZFINID: | ZDB-GENE-060130-104 |
Length: | 332 |
Species: | Danio rerio |
| Alignment Length: | 53 |
Identity: | 19/53 - (35%) |
| Similarity: | 28/53 - (52%) |
Gaps: | 0/53 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 65 CSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFR 117
|..|.|.|:...|.|.::..|..||.|..|..:|....:|.|:|.::|:||.|
Zfish 262 CDKCGTGIVGTVVKARDKYRHPACFVCSDCGMNLKQKGYFFVDGQMYCEAHAR 314
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG30178 | NP_726395.1 |
LIM |
6..61 |
CDD:413332 |
|
| LIM |
65..116 |
CDD:259829 |
17/50 (34%) |
| LIM |
124..171 |
CDD:413332 |
|
| pdlim3b | XP_005157291.2 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
Return to query results.
Submit another query.
