DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and Prickle3

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001277553.1 Gene:Prickle3 / 54630 MGIID:1859635 Length:624 Species:Mus musculus


Alignment Length:204 Identity:55/204 - (26%)
Similarity:80/204 - (39%) Gaps:18/204 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSASICCRCNEKIWPRAV------CSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLD 59
            ::.:||..|.::|....:      ..||..:||..|.|..|..::...::|.....|.|...:.:
Mouse   181 ITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHAGKVYCGRHHAE 245

  Fly    60 KHAARCSACRTPILERGVAAAE-RKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSR 123
            ....||.||...|.......|| |.||...|.|..|..||....:........|.|.:....:..
Mouse   246 CLRPRCQACDEIIFSPECTEAEGRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCACYEARHAEY 310

  Fly   124 CAGCEKPI--DRRAVVALSTKWHA--KCFKCHHCRKRISAREFWIENGQPICA-AC----QTVVP 179
            |.||.:.|  |:..:......|||  :||.|..|.:.:..|.|....|...|: ||    :|..|
Mouse   311 CDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCSRPLLGRPFLPRRGLIFCSRACSLGSETTAP 375

  Fly   180 SP--RNLSA 186
            .|  |:.||
Mouse   376 GPGRRSWSA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 13/60 (22%)
LIM 65..116 CDD:259829 16/51 (31%)
LIM 124..171 CDD:413332 15/50 (30%)
Prickle3NP_001277553.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
PET_Prickle 82..178 CDD:193602
LIM1_Prickle 186..244 CDD:188799 13/57 (23%)
LIM2_Prickle 249..304 CDD:188802 17/54 (31%)
LIM3_Prickle 309..367 CDD:188804 17/57 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..617 6/14 (43%)
Blue background indicates that the domain is not in the aligned region.

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