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Protein Alignment CG30178 and Synpo2
DIOPT Version :9
Sequence 1: | NP_726395.1 |
Gene: | CG30178 / 246501 |
FlyBaseID: | FBgn0050178 |
Length: | 187 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001178892.1 |
Gene: | Synpo2 / 499702 |
RGDID: | 1564779 |
Length: | 1262 |
Species: | Rattus norvegicus |
Alignment Length: | 58 |
Identity: | 16/58 - (27%) |
Similarity: | 23/58 - (39%) |
Gaps: | 5/58 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 KHAARCSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFR 117
||.||.:. |.|..:.:|::..|...:|.|.:..|..|......|.|..|...|
Rat 344 KHRARHAR-----LRRSESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRR 396
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.