DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and fhl3

DIOPT Version :9

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001008165.1 Gene:fhl3 / 493527 XenbaseID:XB-GENE-947662 Length:279 Species:Xenopus tropicalis


Alignment Length:180 Identity:53/180 - (29%)
Similarity:81/180 - (45%) Gaps:6/180 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASICCRCNEKIWP--RAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARC 65
            :|.|..|.:.:.|  |.:...|:|:|.|.|.|..|...:..:.|...:.:..|..||..|.|.||
 Frog    98 SSKCISCEKTVMPGSRKLEYNGQTWHEHCFICNSCQQPIGSRSFIPENQNHYCIPCYESKLAPRC 162

  Fly    66 SACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKP 130
            :.|:..:.:.||...:..||::||.|..|...|....|...:...:|...|..|::.:||||.||
 Frog   163 THCKKSLTKGGVTYRDEPWHKECFVCTGCKTQLAGQQFTSQDEKPYCIKCFGNLYAKKCAGCTKP 227

  Fly   131 I----DRRAVVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAACQT 176
            |    ..:.|......||..||.|..|...:..:.|..:|...:|.||.:
 Frog   228 ITGFGGAKYVSFEERHWHHSCFNCSRCSTSLVGKGFIPDNEDILCRACNS 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:295319 15/56 (27%)
LIM 65..116 CDD:259829 13/50 (26%)
LIM 124..171 CDD:295319 16/50 (32%)
fhl3NP_001008165.1 LIM <5..33 CDD:351770
LIM1_FHL3 36..94 CDD:188807
LIM2_FHL3 98..155 CDD:188811 15/56 (27%)
LIM3_FHL 162..213 CDD:188732 13/50 (26%)
LIM4_FHL3 221..276 CDD:188818 18/54 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I4543
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.960

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