DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and fhl1

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001006703.1 Gene:fhl1 / 448334 XenbaseID:XB-GENE-964257 Length:296 Species:Xenopus tropicalis


Alignment Length:176 Identity:54/176 - (30%)
Similarity:73/176 - (41%) Gaps:7/176 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CCRCNEKIWP--RAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARCSAC 68
            |..|:::|.|  |.|...|..:|...|||..|...:....||....||.|..|:..|.|..|..|
 Frog   117 CSGCHKQIQPGGRNVEYKGSAWHEECFTCSNCKQAIGSGSFFPKGTDVYCVTCHEQKFAKNCVKC 181

  Fly    69 RTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKPI-- 131
            ..||...|:...::.||..||.|.:|.|.|....|..|..:.:|...::...:.:||||..||  
 Frog   182 NNPITSGGITYQDQPWHGDCFVCETCHKKLAGQRFTAVEDHYYCVDCYKSFVAKKCAGCNNPITG 246

  Fly   132 ---DRRAVVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAAC 174
               ....|......||..||.|..|...::.:.|...|.|..|..|
 Frog   247 FGKGSNVVNYEGNSWHEYCFTCKKCSLNLANKRFVRHNEQVYCQDC 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 18/56 (32%)
LIM 65..116 CDD:259829 16/50 (32%)
LIM 124..171 CDD:413332 16/51 (31%)
fhl1NP_001006703.1 LIM1_FHL1 56..109 CDD:188730
LIM2_FHL1 117..174 CDD:188808 18/56 (32%)
LIM3_FHL1 178..230 CDD:188813 16/51 (31%)
LIM4_FHL1 233..296 CDD:188734 18/60 (30%)
Blue background indicates that the domain is not in the aligned region.

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