DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and fhl2a

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001003732.1 Gene:fhl2a / 445277 ZFINID:ZDB-GENE-040808-49 Length:279 Species:Danio rerio


Alignment Length:178 Identity:51/178 - (28%)
Similarity:78/178 - (43%) Gaps:6/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASICCRCNEKIWP--RAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARC 65
            :|.|..|.:.|.|  |.:...|.::|...|||:.|...:..|.|...|:...|..||..:.|.:|
Zfish    98 SSKCHECKKTIMPGSRKMEHKGNSWHETCFTCQRCQQPIGTKSFIPKDNHNYCVPCYEKQFAMQC 162

  Fly    66 SACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKP 130
            ..|:.||...||...::.||:.||.|..|.:.|....|...:.:.:|...|..|::.:||.|..|
Zfish   163 VHCKKPITTGGVTYHDQPWHKDCFLCTGCKQQLSGQRFTSRDDFAYCLNCFCNLYAKKCASCTSP 227

  Fly   131 ID----RRAVVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAAC 174
            |.    .:.:.....:||..||.|..|...:..|.|..:....:|..|
Zfish   228 ISGLGGSKYISFEERQWHNDCFNCKKCSVSLVGRGFLTDRDDILCPEC 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 17/56 (30%)
LIM 65..116 CDD:259829 15/50 (30%)
LIM 124..171 CDD:413332 13/50 (26%)
fhl2aNP_001003732.1 LIM <7..33 CDD:413332
LIM1_FHL2 36..97 CDD:188806
LIM2_FHL2 101..157 CDD:188810 17/55 (31%)
LIM3_Fhl2 162..218 CDD:188815 17/55 (31%)
LIM 221..278 CDD:413332 15/55 (27%)
Blue background indicates that the domain is not in the aligned region.

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