DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG30178 and Lims2

DIOPT Version :9

Sequence 1:	NP_726395.1	Gene:	CG30178 / 246501	FlyBaseID:	FBgn0050178	Length:	187	Species:	Drosophila melanogaster
Sequence 2:	XP_006254658.1	Gene:	Lims2 / 361303	RGDID:	1305273	Length:	341	Species:	Rattus norvegicus

Alignment Length:	178	Identity:	55/178 - (30%)
Similarity:	83/178 - (46%)	Gaps:	6/178 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 ICCRCNEKIWPRAVCSLGKTYHPHHFTCKECG--LVVDPKLFFAVDDDVVCSECYLDKHAARCSA 67
            ||.||:..|..:.:......|||.||:|..||  |..|.:   .:..::.|..|:.......|.|
  Rat   139 ICQRCHLAIDEQPLMFKNDPYHPDHFSCSHCGKELTSDAR---ELKGELYCLPCHDKMGIPICGA 200

  Fly    68 CRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKPID 132
            ||.||..|.|.|..::||.:.|.|..|.|..:....:|..|..:|:.|:.:||...|..|...|:
  Rat   201 CRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIE 265

  Fly   133 RRAVVALSTKWHAKCFKCHHCRKRISAREFWIE-NGQPICAACQTVVP 179
            ...|.|||..|...||.|..|..:::.:..::| :.:|:|..|....|
  Rat   266 GDVVSALSKAWCVNCFSCSACNMKLTLKNKFVEFDMKPVCKRCYERFP 313

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG30178	NP_726395.1	LIM	6..61	CDD:295319	16/56 (29%)
		LIM	65..116	CDD:259829	18/50 (36%)
		LIM	124..171	CDD:295319	14/47 (30%)
Lims2	XP_006254658.1	LIM1_PINCH	15..73	CDD:188717
		LIM2_PINCH	76..127	CDD:188718
		LIM3_PINCH	140..190	CDD:188719	15/52 (29%)
		LIM4_PINCH	196..249	CDD:188720	18/52 (35%)
		LIM5_PINCH	257..310	CDD:188721	16/52 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1593918at2759
OrthoFinder	1	1.000	-	-		FOG0000055
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X39
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010